Cyclopterus lumpus (lumpfish): 117751255
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Entry
117751255 CDS
T09199
Symbol
rin3
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117751255 (rin3)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117751255 (rin3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
Motif
Other DBs
NCBI-GeneID:
117751255
NCBI-ProteinID:
XP_034418859
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All DBs
Position
22:3612611..3629523
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AA seq
1122 aa
AA seq
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MMEASVVCKDTSHASPLTGSLDTPSIPSPASVPPSSPLSPPSLPSSNPPVRPCRPKPPPP
AAKPSQLPSCPPLPASTPPTLPAAQPPVSKPPPPPISKPPPPLSSVPPPLSHNPPPLSLP
TPLSPTPLSPLLSLQPTVSFDDTPSLTPLPAPLLPAIPSPSSSSPPPPPPPPPTPVIPPS
PPTPPLLSPIDRLVASVSVWQPKGLSQDQTTSIMEKEMAGAFLVHGTEDKARTLSVRLPD
EQGAPPVHDLMVKQHKAFLHLDGSSLMFDDLFKLISFYCSSRDILTIPLRLPSAITTATK
REELEVISAKGADFWMSDLNQPAKDQDLALDQNDNRLYLYVNPVTVEGSANKDRNYSTTS
KLDIVTAQNLTSSLQNGEVPQKISTEVNGQAKTTPAQDIKYKRPPPRPPSLGTGSGMGLL
FSSPPSLHTSPPAAERNEEGRGGTGEKEERKTMSTSLTPSRPPVPLQSRAAPRLPPAPLR
RTSSRRSTDREVGEGTEREKGQNPAKITEREVGGEGSKSGQLDEGVEQQNCSQRQESEVI
KDRGNIVREDEKEEKEVKMDKEELKQKSSSHCAPLVKKPSRPVPPPRRKTCSPDAPVCPN
QAGGGSANQTAGIRVPPPSPARRPDVSLYSPQGGTVLVTDPDSCSTSSTEEDGEPNQEQE
PNHNRPAESRSPKAAVRRTPTTIMLDRARYRLSTVLTGLISHYRRLTQRLVELARDPLTY
FGNLVKEHRAFTLENMSKHSSSMELLQEIRQMMTQLKSYLLQSTELQAMLEPQHQYTQDK
LESIVEAALCKSVLKPLREPIYQSLERLHTNDGSLKQLAQNQSGVLGSTTTALGVTTAVP
EASAMEKISIKLNNLHLEYSPQKKIELMLKACKLIYDSMSVSSPGQSHGADDFLPVMMYV
LSRINXSALQLDVEYMMELMDPSVALGEGSYYLTTTYGALEHIKTFDQQRTATRQLSREV
QDSIHRWERRRSALNQERMSQGSVQDFLTVCCPEIGASPRTLGVLPTTTMQQLAEQCAAH
FEQDSYMLSVYMDGVHQLLAPTELALGVKNSSQPGAYCFVYHPMDQPVQQPELGRSCPTE
PPPAPPKEDLTTADLAAVDPVEPEVEPEVEPEAEVEESLISL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagccagcgttgtttgcaaggacacaagccacgcaagccctctgacaggatca
cttgacactccatccatcccctctccggcctccgtccctccatcttctcccctctctcca
ccctccctgccctcctccaaccctccggtccggccatgtcgacccaaaccgccccctcct
gcagcgaagccctcccagctcccgtcgtgtcctcctctacctgcgtcaactcctccgacc
cttcctgccgctcaaccccccgtctccaaaccccctcctcctcccatctccaaacctcct
ccccccctctcctccgttcctccccctctctcccacaaccctcctcccctctctctgcct
acccctctctccccaactcccctctctcccctgctttctctgcagccaactgtctccttt
gatgatactccctccttaactcctcttcccgcgccactgttgccagcaatcccatcccca
tcctcctcatctcctcctcctcctcctcctcctcctcctacccctgttatcccaccatca
cctccaactcctccattgctgagtcctatagatcggctggttgcaagtgtctccgtatgg
cagccaaaaggactcagccaagaccaaaccacgagtataatggagaaagagatggctggg
gcgttcctggttcacggcacagaggacaaggccaggacgctgtcagtacgcctgcctgat
gagcagggggcgccgccggtacacgacctgatggtcaaacagcacaaggcgtttctccac
ttagatggttcctccttgatgtttgatgacctcttcaaactgatctcgttctactgtagc
agcagagacattctgaccatcccactgagattacccagcgctattaccacagcaactaag
agagaggagctggaggtcatctctgctaagggtgcagatttctggatgtccgatctgaac
cagccggcaaaggaccaggacctggctttggatcagaacgacaacagactgtacttgtat
gtcaacccagtcaccgtggaggggagcgccaacaaagaccgaaactactccactacctcc
aaacttgatatagtcacagctcaaaaccttacctcctccctgcagaatggagaagtccca
cagaagatcagcacagaagtcaatggtcaggccaaaaccacgcccgcccaggacattaaa
tacaagcgcccaccaccacgaccccccagcctgggcacagggtctgggatgggcctcctc
ttctcctctcccccctcccttcacacttcacctccagcagctgagagaaatgaggaagga
aggggtggaacgggcgagaaagaagagaggaagacaatgtccacatcactcacgccatcg
aggcctcctgttcccctgcagagcagagctgctccccggctacctcctgctcctctccgt
cgcacctcctccaggagaagcactgaccgagaggtgggagaggggacggagagagagaag
ggacaaaatcctgcaaagataactgaaagagaggtgggaggggagggaagtaaatcaggt
caactggatgagggagttgaacaacagaactgtagccagcgtcaagagagtgaggtaata
aaggacagaggaaacatagtgagagaggatgagaaagaggaaaaagaggtgaaaatggat
aaagaggagctcaaacaaaaatccagctcccactgtgcgccattagtgaagaaaccgtcc
cgtccagtccctccgccgaggaggaaaacgtgttccccggatgcacctgtgtgccccaac
caggcgggaggaggatcagccaatcagactgctgggattagagtgccccctccctcaccg
gcgaggcgtccagatgtgtctttgtactcaccacaggggggtactgtgctggtgaccgat
cctgactcctgctccaccagcagcacagaagaagacggcgagccgaaccaggaacaggag
ccaaaccacaatcgccctgcagagagccgcagccccaaggcagcagtgaggagaaccccc
accactattatgttagaccgagcccgctaccgcctgtccaccgtcctcaccggcctcatc
agccactaccgccgcctcacacagcgcctcgtggagctggccagggacccactgacctac
tttggtaacctggtaaaagagcaccgtgcattcaccttggagaatatgtccaagcactcc
tcctccatggagctgttgcaggagatcagacagatgatgactcagctgaagagttacctg
ctgcagagcacggagctgcaagctatgctggagccacagcatcaatatacacaagacaaa
cttgagagcatcgtagaagctgctctgtgtaagagcgtactgaagccactgagggagcca
atttaccagagtctggagagactgcacaccaacgacggcagcctgaaacagctggcccag
aaccagtccggcgtcctgggcagcaccaccacggctttgggggtaaccactgccgtcccc
gaggcctctgccatggagaagatcagcatcaaactgaacaacctccatctggagtattcc
ccccagaaaaagattgagctcatgctgaaggcctgcaagctcatctatgactccatgtct
gtcagcagtccaggtcagagccatggcgctgatgacttcctgcctgtaatgatgtacgtc
ctgtccagaatcaatncttctgctctgcagttggatgttgaatacatgatggagttgatg
gacccatcggttgcactaggagaaggttcctattatctaaccaccacctacggcgctctg
gagcacatcaaaacttttgaccagcagagaacagcaacacggcagctcagcagagaggtt
caggactccatccaccgctgggagagacgacgctcagctctcaaccaggaacgcatgtcg
caaggatctgtgcaggactttctgaccgtgtgttgtccagagattggagccagtccaaga
actctgggtgtcctccccaccaccacgatgcagcagctagctgagcagtgtgctgcacac
ttcgaacaagactcctacatgctcagtgtgtacatggatggcgttcaccagctcctggct
cccacagagctggccctcggtgtgaagaacagttcccaacccggagcctactgttttgtc
taccacccgatggaccaacccgtccagcagcccgagctcggacgcagctgccccactgag
ccgcctccagctccccctaaggaagacttgaccacagctgaccttgcagctgtggaccct
gtggagccagaggtggagccggaggtggagccggaggcggaggtggaggagagtctgatt
agcttgtag
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