Cyclopterus lumpus (lumpfish): 117751271
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Entry
117751271 CDS
T09199
Symbol
ppp2r5ca
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03015
mRNA surveillance pathway
clum04110
Cell cycle
clum04114
Oocyte meiosis
clum04261
Adrenergic signaling in cardiomyocytes
clum04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117751271 (ppp2r5ca)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117751271 (ppp2r5ca)
04114 Oocyte meiosis
117751271 (ppp2r5ca)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117751271 (ppp2r5ca)
09158 Development and regeneration
04382 Cornified envelope formation
117751271 (ppp2r5ca)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117751271 (ppp2r5ca)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117751271 (ppp2r5ca)
03036 Chromosome and associated proteins [BR:
clum03036
]
117751271 (ppp2r5ca)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117751271 (ppp2r5ca)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117751271 (ppp2r5ca)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117751271 (ppp2r5ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
117751271
NCBI-ProteinID:
XP_034418906
Ensembl:
ENSCLMG00005011442
LinkDB
All DBs
Position
22:13255411..13270562
Genome browser
AA seq
525 aa
AA seq
DB search
MLTCNKSGDRMVVDAPNSNGPFQPVALMHFRDVAPAEQEKLFIQKLRQCCVLFDFLSDPL
SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVMQLLDLFDSEDPRERD
FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
EVMFLNELEEILDVIEPSEFVKVQEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
DNAAKILPIMFPALYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEK
AKSKEREEAWIKIENLAKSNPQFFMYVDSSDLNSPVAMETEVPLIEDVQRLKKTVEAGAT
QLQQDQRKERPMVRRKSELPQDIYTTKALESHRRAEDMLTTHDGL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatgcaataaatctggagacaggatggttgtggatgcacctaattccaatggg
ccttttcagccggtggctcttatgcacttcagagatgtggcccccgcagagcaggagaag
ctcttcatccaaaagctgcggcagtgctgcgttctttttgacttcctgtccgacccgctg
agcgacttgaaatggaaggaagtgaagcgggcggcgctgagcgagatggtggagtacatc
acccacaacaggaatgtcatcacagagcccatctacccggaggtggtgcacatgtttgcg
gtgaacatgtttagaacattgcctccatcgtccaaccccactggagcggagtttgatcca
gaggaagatgagccaacacttgaagctgcgtggccacaccttcagctcgtctatgaattt
ttccttaggtttttagaatcgcccgactttcagcccaacatagcgaagaaatacatcgac
cagaaatttgttatgcagctcctagacctatttgacagcgaggatcccagagagagagat
ttcctcaaaacaaccctccacaggatttatggaaagttcctgggcctgagagcgtacatc
agaaaacagatcaataacattttctataggtttatctatgagacagagcaccataatggt
atagctgaactactggaaatacttggaagtataatcaatggatttgccttaccactaaag
gaagagcacaagatttttctgttgaaggttttattgcctctgcacaaagtgaaatcactc
agtgtctaccatccacagctggcctactgcgtggtgcagtttttggaaaaggacagcact
cttactgagccggtggtaatggctttactaaagtactggccaaagactcacagtcccaag
gaagtgatgttcctcaacgagctggaggagatcctggacgtcatcgagccctctgagttt
gttaaagtgcaggagcctctcttcagacagttggccaagtgtgtgtccagcccgcacttc
caggtggcagagagagctctgtactactggaacaacgagtacatcatgagtctgatcagt
gacaacgcagcaaagattctgcccataatgttccctgctctgtaccgcaactctaagacc
cactggaacaagaccatccacggcctcatctacaatgcgctaaagcttttcatggagatg
aatcagaagctctttgatgactgcacacagcagttcagggctgagaaaaacaaagagaag
gcaaagtcaaaagaacgtgaagaggcttggatcaagatcgagaacctcgccaagtcaaat
ccacagttctttatgtatgttgattcctctgacctcaatagtcctgtagcaatggagacg
gaggtccctttgatagaagatgttcagaggttaaaaaagacagttgaggcgggcgcgact
cagttgcagcaggaccagcggaaagagcggcctatggtgcgacgcaaatctgagttgcct
caggatatctacaccacaaaagccttggagtcccaccgcagagctgaagacatgttgacc
acccatgatggactctag
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integrated database retrieval system
