Cyclopterus lumpus (lumpfish): 117751277
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Entry
117751277 CDS
T09199
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04137
Mitophagy - animal
clum04140
Autophagy - animal
clum04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117751277 (hif1aa)
04137 Mitophagy - animal
117751277 (hif1aa)
04148 Efferocytosis
117751277 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117751277 (hif1aa)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117751277 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
117751277
NCBI-ProteinID:
XP_034418917
Ensembl:
ENSCLMG00005013882
UniProt:
A0A8C3A1Q0
LinkDB
All DBs
Position
22:11616701..11630725
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AA seq
755 aa
AA seq
DB search
MDTGTVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQELPLPHSVSSSLDKASIMR
LIISYLRMRKVLSTDEPMTEDETELESQLNGSYLKALEGFLLVLSEDGDMIYLSENVNKC
LGLAQFDLTGLSVFDFIHPCDQEELREMLLHKTGSKKAKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYDTHTEEPTNGHKEPPVPYLVLICDPIQHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYAPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQIEDV
KSVKEEEQQREEEKEKDEVDSSQPDMSQAPLKDEEKGPELDVIKRFTQALEAKPLASLYD
QLKAEPEALTLLAPAAGDAIISLDFSCPDSEVQLLKEVPLYNDVMLPFTSDKMTLPLSPL
PLSEPLCVATTSSEDVKAKSYAPARSSHNSSEADSQLDFCYPMDSEMSSDFKLDLVEKLF
AIDTEPKTPFTTQAMEDLDLEMLAPYIPMDDDFQLRSLTPEESLSCGPVKSLLSSPVHVP
QDIQSYPSSPFSAAGSRTTYPAPLTAPRPATIVAKRTPQLDKEVSLRTLAAQNSQRKRKL
GDIRELIGQKTLPLEQTEQGKKLKASGSETTRTILLLPSDLASRLLGSTSEGTSSLFTLP
QLTRYDCEVNAPLQGRQSLLQGEELLCALDHVNSI
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaactgtaccagaaaagaaaagggtgagctcggagcggaggaaggagaag
tcgagggatgcagcaagatgccggcgtgggaaggagtcggaggtgttctacgagctggca
caggagctgcccctgccccacagcgtcagctccagcctggacaaggcctcgatcatgaga
ctcatcatcagctacctgcgcatgagaaaagtgctcagtactgatgagccaatgacagag
gatgaaacagagcttgaatcacagctaaatggctcctatctaaaagctttggagggcttt
cttttggtcctgtcagaagatggagatatgatctatctctccgagaatgtcaacaagtgc
ctcgggctggcacagtttgacttgactggactcagtgtgtttgacttcatacatccttgc
gaccaggaagagctgagggagatgctgctccacaaaacaggctccaaaaaggccaaggaa
ccaaacacagagcgcagcttcttcctccgaatgaaatgcactctcaccagcaggggccgc
actgtcaatgtcaaatcagcgacatggaaggtgctccactgctcaggtcatgtccgtgta
tatgacacccacaccgaggagcctaccaacgggcacaaggagccacctgtcccctacctg
gttttgatctgtgaccccatccaacatccctccaacattgaggtccctcttgacaccaag
acttttctcagccgccatacaatggacatgaagttcacgtattgtgatgaaaggatcaca
gagctcatgggttatgctccagaggacctgttgaatcgttctgtgtatgagtactatcat
gctctggactcagaccatcttaccaagactcaccacaacttgtttgcaaagggccaagtc
agcacaggccagtaccggatgttggccaagagaggaggctttgtgtgggtggaaacacaa
gccactgtcatctacaacaacaagaactcccagccacagtgtgttgtctgtgtcaacttt
gtgctcagtggcatccaggaggagaaactgatattgtccctggagcagatcgaggatgtg
aagtcagtgaaggaggaggagcaacagcgggaggaggaaaaagaaaaggatgaggtggac
agcagccagcctgacatgtctcaggccccgctgaaggacgaggagaagggcccagagctg
gatgtgatcaaacggttcacccaggccctagaggccaagcctctggctagcctgtatgac
cagctgaaggcagagccagaggctctcacactgctggccccagctgctggagacgcaatc
atctccctggacttcagctgccctgattcagaggtccagctgctgaaggaggtccctcta
tacaatgatgtaatgcttcccttcaccagcgacaagatgactctgcctctttcccctctg
ccgctcagcgagcctctctgtgtcgccaccaccagctccgaggatgtcaaagctaagagc
tatgctccagcccggtccagccacaactcctcagaggccgacagtcagctggacttttgt
tatcccatggactcagaaatgagctcagatttcaaactagacctggtggagaagctgttt
gccatagatacagagcccaagacccccttcaccacacaggcaatggaagacttagatctg
gagatgttagctccctacatccccatggacgatgacttccagctgcgcagtctgacccca
gaagagtctctttcttgtggaccagtcaaatcccttctgagttctccagtccatgtgcca
caagacattcaaagctatcccagctccccattcagtgcagcaggtagtcgcacaacttac
ccagcaccacttaccgcccctcgtcctgccaccatcgttgctaagaggaccccacagctg
gacaaagaagtctcgctcaggaccctggcagctcagaattcacagcgcaaaagaaagctg
ggtgacataagagagcttattggacagaaaactttacccctggaacaaacggagcagggc
aaaaagctgaaggcctcagggtcggaaacaaccaggaccatacttctgctgccttcagat
ttggcgagtcgtctgctgggaagcacatcagagggcaccagttcccttttcaccctgcca
cagctcacccgctacgactgcgaggtcaacgcccccttgcagggtcgtcagtctctgctg
cagggagaggagctgctgtgcgccttggaccacgtcaattcaatctag
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