Cyclopterus lumpus (lumpfish): 117751280
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Entry
117751280 CDS
T09199
Symbol
rnf144aa
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF144A-A
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117751280 (rnf144aa)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117751280 (rnf144aa)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117751280 (rnf144aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
117751280
NCBI-ProteinID:
XP_034418920
Ensembl:
ENSCLMG00005019682
UniProt:
A0A8C3AGZ3
LinkDB
All DBs
Position
22:complement(12402127..12429199)
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AA seq
295 aa
AA seq
DB search
MTTARYRPTWELAVDPLVSCKLCLGEFPLEQMTTITQCQCVFCTLCLKQYVELLIKEGLE
TAISCPDSACPKRGHLQENEIECMVATEMMQRYKKLQFEREVLLDPCRTWCPSSTCQAVC
QLKEADSPAPPQLVQCAVCALEFCSACKANWHPGQACQENNLPITSYLPGENSSFFKNEE
DDAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLDDDFLLIHYDKGPCRNKLG
HSRASVIWHRTQVVGIFAGFGLLLLVASPFLLLATPIVLCCKCKCSKGDDDPLPT
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggcgcggtaccgtcccacctgggagctggccgtggaccccctggtctcgtgt
aagctgtgccttggggaattccctctggagcagatgaccaccatcacacagtgccaatgt
gtcttctgtacactgtgcctgaagcagtatgtggaactcctgattaaagaaggccttgaa
actgcaattagctgtccagactctgcctgtcccaaaagaggacacttgcaggaaaatgag
attgagtgcatggtggccacggagatgatgcagagatacaagaagctccagtttgaaagg
gaggtgctgctggacccatgtcggacgtggtgcccttcctcgacctgccaggccgtgtgc
caactaaaggaagcagattctcctgcgccaccccagctggtccagtgcgccgtttgtgcc
ctcgagttctgctcggcctgcaaggccaactggcaccccggacaggcctgccaggagaac
aacctgcccattacctcctacctgccaggagaaaacagctctttctttaagaatgaagag
gatgacgcaccaatcaagcgctgtcctaaatgtaaagtttacattgagagggacgaaggc
tgtgcacagatgatgtgcaagaactgcaaacatgccttttgctggtactgtctggagtcc
ctggatgacgactttctcctgatccactatgacaaagggccctgtcggaacaaactgggc
cactccagggcgtctgttatctggcacagaacacaggttgtggggatcttcgctggcttt
ggcctgctcctgctggtcgcctcccctttcctccttctggccactcccattgtcctctgc
tgcaagtgcaagtgcagcaaaggtgatgacgacccattgccaacctaa
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