Cyclopterus lumpus (lumpfish): 117751394
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Entry
117751394 CDS
T09199
Name
(RefSeq) 5'-3' exonuclease PLD4 isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00564
Glycerophospholipid metabolism
clum00565
Ether lipid metabolism
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117751394
00565 Ether lipid metabolism
117751394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117751394
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
117751394
Membrane trafficking [BR:
clum04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117751394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
SACK1
RE_NgoFVII
Motif
Other DBs
NCBI-GeneID:
117751394
NCBI-ProteinID:
XP_034419130
Ensembl:
ENSCLMG00005015038
LinkDB
All DBs
Position
22:complement(9173117..9176834)
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AA seq
512 aa
AA seq
DB search
MSSTYSRLHDGYVSNKGRWTSCVTLAMVLGCLTVLGVLLAITVLKRPPAPKDHETLPQEA
GGSNSSTDQCSMALVESIPQQVKYKANATYGIPLEDVWKDLISMAKVQVEVASFYWTLTG
EDISVKSHSDIPGRNILKELEELPSRNVSVRVVTSVPTVPTNSTDLEILKQKGVQVRKVN
FGRLTSGVLHSKFWIVDRKHVFIGSANMDWRALTQVKELGVVVYNCSSLAKDLHKIFQSY
WIMGQSHSSLPQPWPSNYDTAINKHHPLVVRTDNVSSRLYLTGSPPSFCPPSRTQDLEAI
VSIISEAQHYVDVAVMEYFPTTRFEKPQRSPSKETIGFPLNYLPLWPYFLTLFLHLNRYW
PFIDDAIRTAAFERKVKMRMLISCGRDSDPAMLPFLKSLASIDSPHQDIDIQIKLYIVPV
GNQSDIPYSRVNHNKYMVTDKAAYIGTSNWSGDYFLTTAGVGLVISQHAPHPVWKTKALQ
GQLRAVFDRDWYSEFAVDLADLGHHPDCALSR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctacgtatagcaggcttcatgacggttatgtttcaaacaaagggaggtggact
agctgtgtgacattggctatggttttgggatgcctcacagtcctcggggtcctgcttgcc
atcacggtgctgaaaagaccaccagcccccaaagaccacgagacacttcctcaggaagct
ggggggagcaattcctctactgaccagtgcagcatggcgctggtggagagcatccctcaa
caagtgaaatacaaagccaatgcaacttatgggatccctctggaagatgtctggaaagat
cttatctccatggcaaaggtccaagtggaagtggcctctttctactggactttaactggt
gaagacattagcgttaagtctcactccgacatacctggaaggaacatcctgaaagaactt
gaagaattgccctccaggaatgtatctgtccgagtggtgaccagtgttcccaccgttcca
acaaactccacagatttagagatcttaaaacagaaaggagttcaggtgaggaaggtgaac
tttggacgcttgacaagtggcgtcctccacagcaagttctggatagttgacagaaaacat
gtgtttattggaagcgccaacatggactggagggctctcacacaggtgaaggaactggga
gttgttgtctacaactgctccagtctagcaaaggaccttcataagattttccagtcctac
tggataatggggcaatcccacagctccctaccacagccctggccttcaaattatgatacg
gccatcaacaaacatcaccccctggtggtgagaaccgataatgtctccagcaggctgtac
ctcacaggttctccaccatcattctgtcctccatcgaggactcaggacctagaggctatt
gtctccatcatctcagaggcccaacactatgtcgatgtagccgtcatggagtacttcccc
accacacgctttgaaaagcctcagaggtcgccctcaaaagaaaccattggttttccattg
aactatttgcctctttggccttatttcctcactttattcttgcacctgaatagatactgg
cctttcattgatgacgccatcaggaccgctgcattcgagagaaaggtgaagatgcggatg
ctgatcagctgtgggcgggactctgatccagccatgctgccattccttaagtctcttgct
tcaattgacagccctcaccaggatatcgacatccaaataaaactgtacattgtgccagtg
ggaaaccagtctgatattccatatagcagagtcaaccacaataaatacatggtgactgat
aaagcagcatacattggtacctccaattggtcaggggactactttctgaccacagctgga
gtgggtctggtgatttcccagcatgctcctcatcctgtatggaagaccaaggccctgcag
ggtcagctgagggcagtctttgacagagactggtactctgagtttgctgtggatcttgct
gacctgggtcaccacccagattgtgcattatcaagatga
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