Cyclopterus lumpus (lumpfish): 117751399
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Entry
117751399 CDS
T09199
Symbol
rab11fip5a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117751399 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117751399 (rab11fip5a)
Membrane trafficking [BR:
clum04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117751399 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
117751399
NCBI-ProteinID:
XP_034419138
LinkDB
All DBs
Position
22:complement(16761204..16793575)
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AA seq
1465 aa
AA seq
DB search
MSSLTVEEDQKWLPTHVQVTVLRGRGLRGKGKHGTSDVYTIIQLGKEKYSTCVAEKTTEP
EWREECTFELQPGVPETGGRSSCPAGSNELVLIAMHRALMGLDVFLGQAVIQLDKIFHET
RCVKNEWYKLNSKSGKKEKERGDIQVTVQFTRNNLTASMYDLIMKDKGASTFGKLKERIK
GKLRPSDEDSASAVLPSGYGSLHRMRQRLPSDGGGEEDYEDDEGGEARRSKMRTFFLRGK
LRKSSDARSSTSLGSESSESSRGGSLSPTAGISVVVSDLSNSPSNSSNLTGDNSPEHTSS
LICEFGDDDNGEITIAVPQLTVCVNGSHAYGVQPPDPGSGKPADSLGLGPLQNSLPHSVS
LQNLRPSTDLLKGPVGDGRRWSFDKPCEEEKAAIAAALEKSGPMLGDEEEQSGRAAPPKS
ASSSSSTVESESHGKKQRMNLSSQGRSESAGRGENQSRDESEQAPAAAEEKHKGWFGSKD
SHNKPSVVMSPKLEPSTDPHPPPSHHPPGLPVDPTPLVPPLHHTNPFSHSQTTPPPISPC
NPFFSLLQHNPFYDDTLTAQPLKPLLPPLPYLSSSRPPIAHLFPQAGNPTPTYGDPPTED
AITGTVAKGEAMGKAVERPLPPAPMEVEKPLRRKLPRHLTCAGELDPDSEWDKSFEAFAA
GRLQSSEDLTTDYKTQPNTPSDHPLEQGDDKAATLPRTDLNTNAPHRQPCTGFASDAQKA
IAQATSECHLDTFAQFLETIPEHASFESDNMALSDSPKRDACAETNRANSATNANDLTDT
NMHQASCHSSFVKLNSSSPDPGSSGIHSSEAEEDFISCLSSYSDKFSASSSEEAEAQNFE
SKILCFQKSYHSSVVKHAKPSESEEGVTDRSTDVSLADGAQHTVVQHGDGDEEADFISLE
GSLALQPPSLTHQQPVINTSEDAVTLSPNFSSPDLLPELQTKSEESLQSDNENGEKFPDE
FLPDFSTVIHDSSVSVSSTTDVTASTTPDDKLYSTHPSLHIITSSPDVRRRSLDSPIVST
SLGRQDASQHSPLPFGPFADFLNTSHIANGPSQDFDDALLHTRESDQSTSSFFQSLYVST
DSQDYQTCESQSASKCSSGSERNETLHSANVTLCGELNDARTTAGAAWGREDSTNMWKKP
RYEEVNQTDQSGGSISGAEDKTATLEPIFPMADDFDLLPTASTDSYVSCDLRKLSEGGVE
SQHAVFGGVLSMRPEAQSASLHRSQSEGSLTAAFDELLLLPSFGSDPGAIQESSSTLPGS
HLPSLTSFDPCITPQSSSSPITLCSLPPLANTSARSPHSTARAAAPKPMLQETTPPPPPQ
RAANQQNSPHPVKPLTTAILAEEKRTEGRSVLATGLEKLKFTIHPGRSSQLSEQETERKK
SITEGAGSYYHLNHRELVALLVQREADLTRQKAEFERQKLLLAKREVELRKLKPQVKDLE
DYIDTLLVRIMEQKPTLLQVRSKLK
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaaccgtagaggaggaccagaaatggttaccgacacacgtccaggtgacg
gtattgagaggcaggggcttacggggcaagggcaagcacggcaccagcgacgtgtacacc
atcatccagctggggaaggagaaatactcgacctgcgtggcggagaagaccaccgagccg
gagtggagggaggagtgcacgttcgagctgcagcccggcgtgccggagaccggcgggcgg
agcagctgtccggccgggagcaacgagctggtcctcattgcgatgcaccgggcgctcatg
gggctggacgtgttcctcggacaggcggtgatccagctggataagatcttccatgagact
agatgcgtgaaaaacgagtggtacaagctcaactccaagtcgggcaagaaggagaaggag
cgaggagacattcaggtcacggtccagttcacccgcaacaacctgacagccagcatgtac
gacctcatcatgaaggacaaaggcgcctccaccttcggcaagctcaaagagcgcatcaag
gggaagctgaggcccagcgacgaggactcggcgtcggccgtcctaccgagtggttacggg
tccctgcaccggatgcggcagcggctgccgagcgatggaggcggggaggaggattacgag
gacgacgaggggggcgaggcccggcggagcaagatgaggaccttcttcctgagagggaag
ctgaggaagtcgtcggacgctcgttccagcacgtcgctgggctcggagagcagcgagtcg
tcacggggagggagcctgagccccacggccggcatcagcgtggtggtctccgacctctcc
aactcaccgagcaacagcagcaacctgacgggcgacaacagcccagagcacacgtcctct
ctcatatgcgagtttggtgatgatgacaacggtgagatcaccatcgcagtgcctcagctc
actgtgtgcgttaacggaagccatgcgtacggcgtccagcccccggacccgggctcagga
aaacctgcggactctttaggcctggggccgctgcagaattctttgcctcactccgtgtct
ctgcagaacctcaggccttccacggacctcctcaaaggccccgtcggagacgggcgccgc
tggtcttttgacaagccctgcgaggaggagaaggcagccatagcggcggccctggagaaa
agcggccccatgctgggtgacgaggaggagcagtcgggacgggctgctccgcccaaatcc
gcctcctcctcctcctccacggtggagtcggagagccatgggaagaagcagaggatgaac
ttgtcttcccaggggaggagcgagtctgcgggcagaggggagaatcagtccagggatgag
tctgaacaggcccccgctgccgccgaggagaaacacaagggatggtttggatccaaggac
tcgcacaacaaacccagcgtggtgatgtcacctaaactagagcccagcactgacccccac
ccaccacccagccaccacccaccgggtcttcctgtagatcccacccctctggttcccccg
ctgcatcacactaaccctttctcccactcacagaccacaccgcctcccatatccccctgc
aaccctttcttctctctcctccagcacaaccctttctatgacgacacgctaaccgctcag
cccctaaaacctttgctgcctcctctgccctatctctccagttcccggccccccatagcg
catctctttccgcaggcgggtaaccccaccccgacttacggcgacccgcctacagaggac
gccatcaccggtacagttgcaaagggcgaagcgatgggcaaagccgtggaacgacctctt
cccccggctccgatggaagttgagaaacctttacgcaggaagctgccccgccatcttacg
tgtgccggggagctggacccggactcggagtgggacaaatcttttgaagcgtttgcagct
ggcaggctgcagtcttctgaggatctgaccacagactacaaaacgcagccaaacacaccc
agcgaccatccactggaacaaggcgatgacaaagcagcgacgctaccaagaacggatcta
aacactaacgcaccacatcgtcaaccttgcacaggatttgcatccgacgcacaaaaggcc
atcgcccaggcgaccagcgaatgtcatcttgacacatttgcacaattcctcgagacaatc
ccggagcacgcgagctttgagagtgacaacatggctttgagtgactcgccaaaacgggat
gcttgcgctgagactaatcgagctaacagtgctactaacgcaaacgatttaaccgacact
aatatgcatcaggcctcctgtcactcctcgtttgtaaagctcaacagcagctctccggat
cctggttcttcgggtatccacagttcagaagcagaagaggatttcatctcctgtctctcg
tcttattcagacaaattctctgcatcctcctccgaggaagccgaggcacagaactttgaa
agcaaaatcctctgctttcagaaatcatatcattcatcagttgtaaagcacgcaaagccc
tcagaatcagaggagggcgttaccgacaggtccaccgatgtatctttagccgatggagct
cagcacactgttgttcagcacggtgacggtgatgaagaggcagatttcatcagcttagag
ggttcactggcactgcagcccccatcgcttacacatcagcagcctgtgatcaatacaagt
gaggacgctgttactctgtcaccaaacttttcaagccctgacttgttaccagaactacag
acaaaatctgaagaatctttacagtctgacaatgaaaatggagagaaattcccagatgaa
tttctaccggatttctcgacagtgatacatgattcctctgtgtctgtaagcagcactacg
gatgtgacggcttctacgactccagatgataaactctactccacacacccatcactacac
atcatcacctcctcccccgatgtgaggcggaggtcgttggactcgcccattgtgagcact
agtttaggacggcaggatgcaagccagcattccccgctaccattcgggccttttgccgat
ttcctcaacaccagtcacattgcaaacggtcccagccaagactttgacgacgcgctgttg
cacacccgagagtccgatcagagcaccagcagcttttttcaaagcctttatgtcagcacc
gactcgcaggattaccaaacctgtgagtctcaatcggcgtccaagtgctccagcggctcg
gagcgaaacgagacgctgcactctgcgaacgtcacgctctgcggcgagcttaacgacgcg
cgtacaaccgctggtgctgcgtggggccgagaagattccaccaatatgtggaagaagcca
cgttacgaagaagtcaaccagaccgaccaatctggaggatccatcagtggcgctgaggac
aagacggcaactcttgaaccaattttcccgatggctgatgacttcgatttactccccacg
gcgtcgacggactcttacgtgagctgtgatctgaggaagctctccgagggaggtgtcgaa
agtcagcacgccgtcttcggtggcgttctgtcgatgcgccctgaggcacaaagtgcttcg
ctacaccgctcccagtctgaaggctctctgactgctgcctttgacgaactcctcctccta
ccctcctttgggagcgatcccggtgcgatacaggagtcctcttccactctgcctggctct
cacctcccctctttgacctcctttgatccttgtataactcctcaaagtagtagctcccct
atcacgctctgttccctgcctcctcttgccaacacttctgcgaggtcaccacacagcacg
gcgcgagctgcggcgccaaagccaatgcttcaggagacgacgcctcctcctcctccgcag
cgggcagccaatcagcagaacagcccccacccagtgaagcccctgaccactgccatactg
gctgaggagaagcggactgagggccggtcagtgctggccaccggcctggagaagctcaag
ttcaccatccacccggggaggagcagccagctcagcgagcaggagacggagaggaagaag
tccattacagagggggcgggctcgtactaccacctgaaccaccgcgagctggtcgccctg
ctggtgcagcgggaggccgacctgacgaggcagaaggcggagtttgagcgtcagaaactt
ctgctggctaagcgggaggtggagctgcggaagctgaagccgcaggtcaaagacctggag
gactacattgacacgctgctggtgcgcatcatggagcagaagcccactctcctgcaggtg
cgctccaagttaaagtga
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integrated database retrieval system
