KEGG   Cyclopterus lumpus (lumpfish): 117751443
Entry
117751443         CDS       T09199                                 
Symbol
cdh16
Name
(RefSeq) cadherin-16
  KO
K06810  cadherin 16, KSP-cadherin
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clum04515]
    117751443 (cdh16)
Cell adhesion molecules [BR:clum04515]
 Cadherins
  Major cadherins
   117751443 (cdh16)
SSDB
Motif
Pfam: Cadherin Cadherin_4 Big_9 InlK_D3 He_PIG Protocadherin
Other DBs
NCBI-GeneID: 117751443
NCBI-ProteinID: XP_034419197
LinkDB
Position
3:11453931..11481847
AA seq 879 aa
MERHWPLVLLAGNKVVKHLHLKVLTINPPKEYKCAIFPPNLNSSHASQREHTYHLDKAPM
ADRGATTMRILLVVLYTFAPCSGANVKIGVPENYDGIFPWYLSKLHSLPGNYSDLVVTGD
DEGIFGVDAQFLYALKPLDREKQPSYSLQVSFRTSEHRQSFTVEVCVIDKNDNVPTIIEE
SMRGSVQLGLLKGIPFMQVEARDRDDRNTAHAELRFTLMEQTPRIPSSQMFFINSITGEV
SLTEEGASTLDPEMCGRYKLSVMVKDMAGRANAFFSSGIVTVEVTGNTWASPDPVRLQEN
LPGPYPIRISQVKWSGSQAEYSLEGEFPEMLFTINREGVIYLNAPLDRETQDQFQISIVV
ERPDGKEIAKPVELRVMVGDANDNRPTFPQAQYHTVVKELSARGTEILTVQAADNDDPKT
DNVRIFYRLVGQIPESPRALFRVDRDSGVISVQADSMEGTAPQYTLTITAEDAKGLNSSC
TVVVTVQDENNNPPLFSQHEYGPFHIPEEAAVGTTVTAVLAGDADVRGGDSWQVDYRLES
GNEEEVFTLVTDTQTNEVSLILSKVLDFERESEYILVISAQNPVALVRGRYGPASTATVS
IYVDDVNEGPILSQSHYEVTVREGEEPGRVIATIRGYDPDSHPIRYSLQGDTKKYFSIGK
YSGELKTVQALDREENSTYTMEVIAVDGRNSSLSASTLVTVQILDVNDNSPVLVGDYSWK
YLCTPRWEDQALVLASRDSDGPQHGGRLNFSLRSDATVRRNWKLTPINDTHTNLSLNILY
LAPEVYTVPFTISDSSSPPRSTFINLPVTVCPCNVRGNCKMAAKQLQGMPTIQSAVGILL
GTFAVIGTILIVVFVRLSYQNPKRPTKTNQERVPLKMSI
NT seq 2640 nt   +upstreamnt  +downstreamnt
atggaacgtcactggccattggttttactggcaggaaacaaggtagttaagcatcttcat
ctgaaggtgttaaccattaatccaccgaaggagtacaagtgcgcgatttttccacccaat
ttaaactcctcacacgcctctcagagggaacacacatatcatttggacaaggcacccatg
gctgacagaggagctacgacaatgcgcatcctattggtggtactttacacatttgcacca
tgctctggggcaaatgttaaaattggtgtccctgaaaactacgatggcattttcccatgg
tatctgtccaagctccatagcctgccaggtaattacagcgacctggtggtaacaggggat
gatgaggggatattcggagtcgacgctcagtttctctacgctctaaaaccgctggacaga
gagaaacagccgtcttactccctgcaggtgtccttcagaacgtcagagcaccgccagagc
ttcactgtcgaagtgtgtgtcatcgacaagaacgacaacgtgcccactatcatagaggag
agcatgagaggcagcgtgcagctcgggcttctcaaaggaatcccattcatgcaggtggag
gcacgggatcgggatgaccgcaacaccgcccacgccgagctgcggttcaccctcatggaa
cagacacccaggattccctccagccaaatgttcttcatcaactccatcactggagaagtt
tccctcaccgaggaaggagcctccactcttgacccggagatgtgcggccgttacaagctc
tcagtgatggtgaaggacatggcggggagggcgaacgctttcttctccagcggcatcgtt
accgtcgaggtgacgggaaacacctgggcatcgcccgaccctgtccgactccaggagaac
ctccctggtccctacccgatccgcatctcacaggtcaaatggagtgggagccaggcagag
tacagtctggagggggagtttccagagatgctcttcaccatcaacagagaaggagtcatt
tatctcaacgcccctctggacagagagacacaggaccagttccagatcagcattgtggtt
gagcgtccagatggaaaagagattgccaagcctgtggaattgagggtgatggtgggcgac
gccaatgataacagacccaccttcccacaggcacagtaccatactgtggtcaaggaactg
tccgctcgagggacagaaatcctgacagtgcaggcggccgataacgacgatcccaagaca
gacaacgtgcggatattctaccgtttagttggtcaaattccagagagtcctcgcgccctc
ttccgagtggaccgtgactcaggggtcatctccgtgcaagcagacagtatggagggaaca
gcgcctcaatacactctcaccatcactgctgaggatgctaaaggtctaaacagttcatgc
accgtggtcgtgacggtgcaggatgagaacaacaacccgccactcttctcccaacacgag
tatgggccctttcacattccagaggaggctgcagtgggcaccacggtaacagctgtgctg
gcaggtgatgcagatgtccgcggaggagacagctggcaggtggactaccggttagagtct
ggaaacgaggaggaggtctttacattggtgacagacacgcagaccaatgaggtctccctc
atcctttcaaaggtcttggactttgagcgtgagagtgagtatatcctcgtgatcagtgct
cagaacccagtggctctggtccgtggccgttacggtcctgcgtcaacggcaacagtctcc
atctatgtcgacgatgtgaatgaaggcccgatcttgtctcaaagccattatgaggtgact
gtcagagagggggaggaaccgggacgggttatcgccaccatcagaggttacgaccctgat
tctcacccaatcagatattctcttcaaggggacaccaagaaatatttttcaatagggaag
tattctggtgaactaaagactgtgcaggccttggacagagaggagaacagcacgtacacc
atggaggtcattgcagtggatggccgaaactcatccttgtctgcgtccaccctggtgacg
gtccaaatcctggatgtgaacgacaacagcccagtgctggtcggagactattcctggaag
tacctgtgtacgcctcgctgggaggaccaagctctggtgctggcctcacgggacagtgat
gggccacagcacggaggacgtctgaacttctccctgcgcagcgatgccacagtccgtcgt
aactggaagctcacacctattaatgatactcacaccaacctgtccttaaacatcctgtac
ctggcccctgaggtctacactgtgccctttaccatctctgacagcagctctcctcccagg
agcaccttcataaacttgccagtgacagtgtgtccctgtaacgtacgagggaactgcaaa
atggctgccaagcagttgcagggcatgccaactattcagtctgcagtgggtattctgctt
ggcacctttgcagtcatcgggactattctcatcgttgtgtttgtgagactctcctaccag
aatcccaaaaggcccaccaaaactaaccaggagcgagttcccctgaagatgtcaatctaa

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