Cyclopterus lumpus (lumpfish): 117751544
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Entry
117751544 CDS
T09199
Symbol
khdrbs1a
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 1a
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117751544 (khdrbs1a)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117751544 (khdrbs1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Qua1
KH-I_KHDC4-BBP
Sam68-YY
KH_1
STAR_dimer
KH_5
Motif
Other DBs
NCBI-GeneID:
117751544
NCBI-ProteinID:
XP_034419354
Ensembl:
ENSCLMG00005012011
UniProt:
A0A8C3FZH5
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All DBs
Position
22:8949370..8955104
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AA seq
372 aa
AA seq
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MEDTKYLPELLAEKDSLDSSFTHATKLISAEIERIQKGDTKKEPEKETYLDLFATKNLKL
KERVLIPTKQYPRVNFVGKLLGPQGSTIKRLQEDTGAKISVLGKGSMRDKNKEEELRKGG
EAKYAHLSMELHVFIEVMAPVPEAYMRIAHAMEEVKKFLIPEPGEHDQYMDPHFLNGSQD
GSGRGRGGHLGRGRGGPPGAGGPRGRGMPRGAPRGAMRGGGPRGGLGRGNGHRGAPSGRG
GPPSAPNRGGSAPRSRPPAAGAPRMLPSAAMSHQGPPSASQSKSDGYEDYPAYEEQYAEP
AYEGYDNYYNQQPAPADTEYYDYGHGEAQETPYEPYAQDEWDNSWSSSGAGGKTAAPRQS
KGTYREHPYGRY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaagacactaaataccttccggagctcctggctgagaaagacagcttggattcgtcg
ttcacgcacgcaaccaaacttatttctgcagagatcgagaggattcagaaaggcgacacc
aagaaagagccagagaaggaaacgtatctggacctgtttgccaccaagaatctcaagttg
aaagagcgggtactcattcctaccaagcagtacccaagggtcaactttgttggtaagctt
ttgggaccacagggcagcacaatcaagagactccaggaagatactggtgcaaagatttca
gtgctgggtaaaggctccatgcgggacaagaataaggaggaagagttgaggaaggggggc
gaggccaaatatgctcatctttccatggaactgcacgtgttcattgaggtgatggcaccc
gtaccagaagcctatatgcgcatagctcatgctatggaggaggtcaagaagttccttatc
ccggagcctggagaacacgaccagtacatggatcctcacttcttgaatggatcccaggat
ggttcaggcagggggcgaggtggtcacctcggaagaggcaggggtggaccacctggtgct
ggaggaccacgggggcgagggatgccacgtggggctccccggggagcgatgcgtggtgga
ggaccacgggggggattagggcgtggcaacgggcataggggtgcaccatcaggtagaggt
ggaccgccgtctgcgcctaatagagggggctcggctccccgctctagaccacctgcagca
ggggctccaagaatgctcccctctgcagccatgtcccatcagggtcctccctcagcatca
cagtccaaatctgatggatatgaagactatcctgcatatgaagagcagtatgcagagcct
gcttatgagggatacgacaattattataatcagcaaccggcacctgcagatactgaatat
tatgattatggacacggcgaggcccaggaaaccccgtacgagccttatgctcaagatgag
tgggacaactcatggtccagctccggggctggaggcaagaccgcagcccccaggcagtcg
aagggaacgtatagagagcatccctatggaagatactga
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