Cyclopterus lumpus (lumpfish): 117751628
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Entry
117751628 CDS
T09199
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03030
DNA replication
clum03410
Base excision repair
clum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117751628 (pole2)
03410 Base excision repair
117751628 (pole2)
03420 Nucleotide excision repair
117751628 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clum03032
]
117751628 (pole2)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117751628 (pole2)
Enzymes [BR:
clum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117751628 (pole2)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
117751628 (pole2)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
117751628 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
Albumin_I
Motif
Other DBs
NCBI-GeneID:
117751628
NCBI-ProteinID:
XP_034419450
Ensembl:
ENSCLMG00005021270
LinkDB
All DBs
Position
22:complement(14257355..14262583)
Genome browser
AA seq
528 aa
AA seq
DB search
MDVARQVKTKVSAGFKMRGLILRPEASRHLVEVLESVNASELDDIIEKVLDAVEKQPLSS
SMIELSVVEIAVQDCTQSCDETIDNVFNIIGAFDVPRYIYSTERKKFVPITMTSHSAPSL
CGLAKDKAELFRERYTILQQRIHRHQLFTPPAIGAAVDEGQNKFQLKTIEALLGSTSKLG
EVIVLGMVTQLKEGKFYLEDPSGTVQLEMSKAQFHNGLYTESCFVLAEGWYEDAVFHVNG
FGFPPTESSSGTRAYYGNLNFFGGPSTTSVKASAKLKQLEEENEDAMFVIVSDVWLDNVE
VMEKLNTMFSGYASMPPTSFILCGNFSSAPYGKTQIKSLKDSLKALADAICAYPSIHSSC
RFVFVPGPEDPGPGNILPRPPLADYITEEFRQRVPCSVFTTNPCRIQYCSQEIVIIREDL
VNKMCRNCVRLPNNNLDIPNHFVKTILSQGHLTPLPLYVSPVFWAYDYSLRVYPVPDVII
FADKYDPFSIKNTDCLCVNPGSFPKSGFTFKVYYPSSRTVEDSKLQGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgctcgccaagtaaagactaaagtgtccgctggcttcaagatgcggggactt
atacttcgacctgaggccagcagacaccttgtggaggtcctggagtctgtcaatgcctct
gaactggatgatattattgaaaaagtattggatgcagtggaaaagcaaccattgtcctct
agtatgatagagctgtctgtggtggagattgcagttcaggattgtactcagtcttgtgat
gaaaccatagataatgtttttaacattattggagcctttgatgtgcccagatacatttac
agcacggagcggaagaaatttgtacccattaccatgacgagccattcggcacccagtctg
tgtggtttggccaaagacaaagctgaactcttcagggagcgctacaccatcttacaacaa
cgtatccatcggcaccagctcttcaccccacctgcaataggagctgctgttgacgagggt
caaaacaaatttcagctcaagacaattgaagcactgcttggtagcacatcaaaactggga
gaagtgattgtactcgggatggtcacacaactgaaagagggtaaattttacctggaggac
ccaagtggaacagtacagcttgaaatgtccaaagcacagtttcataatggcctctacaca
gaatcctgctttgtactggcagagggttggtacgaggacgctgttttccacgttaatggc
ttcgggtttcccccaacggagtcgtcatccggcacgagggcatactacggcaatctgaac
ttctttggtggtccgtccaccacttcagtgaaagcatcagccaagctgaagcagctggag
gaggagaatgaagatgccatgttcgtcattgtttctgatgtttggctggacaacgttgaa
gtgatggaaaagctcaacacaatgttctcaggctatgcttcgatgcctcctaccagtttc
attttgtgtggaaacttctcttctgccccgtatggaaaaacacagatcaaatcactcaaa
gactcactgaaggctcttgctgatgctatatgtgcgtaccctagcattcacagcagctgt
cgctttgtgtttgttcctggccctgaagacccaggtccaggcaacatactgccacgtcct
cctttggcagattatatcacagaggagttcaggcagagggtgccatgttccgtgttcact
actaacccatgcaggatccagtactgcagccaagagattgtcattatcagggaagacctg
gtcaacaagatgtgcaggaactgcgtccggttgcccaataacaatcttgacattccaaac
cattttgttaagaccatcttatcccagggtcacttgactccactccctctgtatgtcagt
cctgtattctgggcgtatgactactccctgcgtgtctacccagtccctgatgtcatcatc
tttgcagacaaatacgacccgttcagcattaaaaacacagactgcctctgtgtcaacccg
ggctcgttccccaaaagtggcttcacatttaaggtgtattacccatccagcagaactgtt
gaagacagcaaacttcaaggactctaa
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