Cyclopterus lumpus (lumpfish): 117751657
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Entry
117751657 CDS
T09199
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117751657 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117751657 (slc6a5)
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117751657 (slc6a5)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117751657
NCBI-ProteinID:
XP_034419493
Ensembl:
ENSCLMG00005022683
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All DBs
Position
3:25806845..25829481
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AA seq
785 aa
AA seq
DB search
MDFSDQREMAKQPADASAPTGYVPAQQPDGAAGFTASKPDNNAAACTPPPPSPHPHHHPA
PPPPCNEGKTFSNTENKPGELDSSKAYGTFKNAAPAAPGAAAAVNSAALGKDSVGSARAG
SAQCGDPLRAEQHNANWTAMSQTTIVLGTDGNTSVQPVAAAGAEDDDDEGDENKARGNWT
NKMDFILSMVGYAVGLGNVWRFPYLAFRNGGGAFLIPYLTMLGIAGIPIFLMEVSLGQFA
SQGPVSVWKCIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCRNEW
NTVECKDKDMLLLDTCILRDRNITSIKNSSFCLSANTVGNLTKLMNMTVDSNKTYVSPSE
EYFKYNVLHISKGIEFPGDIRWPLAGCLLLAWIIVYCSLAKGIKSSGKVVYFTATFPYVV
LVILLIRGITLPGAFDGILYFITPKWEKLSDAKVWKDAATQIFFSLSAAWGGLITLSSYN
KFHNNCYSDTIIVTCTNSATSIFAGFVIFSVIGFMAHELKVPIEDVADEGPGIAFVVYPE
ALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIITSVSDEFPKYLRKNKPFFTLICCCC
FFFLGFPMITENGMFMLQLVDTFAASYSLVIIAICELMGISYLYGLQRFCEDIEMMVGFQ
PNRFWRVCWAFVTPTILTGILGLSLYQWKGMTYEDYTYPTWSMVMGWLMVICSVIWIPIM
FFIKMYLAPGTFSERLKLVCSPQPDWGPFLLKHRGERYKNMTDPLGTNSLGLKLPPKDFQ
LDSYQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggatttctctgaccagagagaaatggccaaacagccggccgacgccagcgctcccacc
ggctacgtcccggcgcagcagcccgacggagctgcgggatttacagcaagcaaaccggac
aacaacgcggctgcgtgcacgccgccgcccccctccccccacccccaccaccacccggcg
ccgccgcccccgtgcaacgagggcaaaactttttcgaacacggaaaataaaccgggagag
ctggacagcagtaaagcgtacgggacgtttaagaacgccgcgccggcggcccccggagcc
gccgcggccgtcaactcggcggccctcgggaaggattccgtcggttcggcccgcgcaggg
tccgcacagtgcggcgacccgctgcgggcggagcagcacaacgccaactggacggctatg
agccagaccaccatcgtactggggacagatgggaacacgtctgtgcagcccgtggccgcg
gcgggggctgaagatgatgacgatgagggagatgagaataaggccagaggaaactggacc
aataagatggactttattctgtccatggtgggctacgcggtggggctggggaacgtgtgg
aggttcccttatctcgccttccgaaacggtggaggagcctttttgatcccctacctgaca
atgctgggcatcgccggcatcccaatctttctgatggaggtgtccctgggccagtttgcc
agccaggggcccgtgtcagtgtggaagtgcatcccagctctgcaaggttgcgggattgcc
atgttgataatatctgtcttgatagccatatactataatattataatgtgctggacactg
tactacctgttcgcttcgttgaagggctcactgccatgggctaactgtaggaatgagtgg
aacacggtggaatgtaaggacaaagacatgctgctgttagacacctgcatactgcgggac
agaaacatcacctccatcaagaactcctctttctgtctgtccgccaacaccgtgggaaac
ctgaccaagctgatgaacatgaccgtggacagcaacaagacctacgtcagccccagcgag
gagtacttcaagtacaacgtgttgcacatctccaaaggaatcgagttcccgggagacatc
cgctggcctctggcgggctgcctgctgctggcctggatcatcgtctactgctctttagcc
aaaggaatcaagtcgtcagggaaggtggtgtatttcacagccacgtttccctacgtggtg
ctggtcatcctgctgatcagaggcatcaccctccccggggccttcgacggcatcctctac
ttcatcacgccgaagtgggagaagctgagcgacgcaaaggtgtggaaagacgcagccact
cagatcttcttctctctgtcggcggcttggggaggcctcatcactctctcttcctacaat
aagttccacaataactgctacagtgatactattattgtgacatgtacaaacagtgccacc
agtatatttgccgggtttgtcatcttctccgtcatcggtttcatggcacatgagttgaaa
gtgccgatagaggatgtggcagatgaaggtccaggcatagcgttcgtggtgtatccagaa
gctttgaccagacttcctctgtctcctttctgggcgatcatcttcttcctcatgctcctg
actcttggcctggataccatgtttgccaccatcgagaccatcataacctccgtgtccgac
gagttccccaaatacttgaggaagaacaagcccttcttcaccctgatctgctgctgctgc
ttcttcttccttgggtttcccatgatcacagagaacgggatgttcatgctgcagctggtg
gacacgttcgcagcctcctactctttggtcatcattgcgatctgcgagctgatggggatt
tcctacctctacggtctgcagaggttttgcgaagacatcgaaatgatggttggtttccag
ccaaaccgattctggagggtctgctgggcctttgtgactccgaccattctgacgggcatc
ctgggactgagcctgtaccagtggaaggggatgacgtacgaggactacacctaccccacc
tggtccatggtgatgggctggctcatggtcatctgctccgtcatctggatccccatcatg
ttcttcattaagatgtacctggcgcccggcaccttcagtgagcgcctgaagctggtctgc
tcccctcagcccgactggggtccgttcctgttgaagcaccgcggagaacgctacaagaac
atgaccgaccctctgggaaccaactccctgggcctcaagctgccgcccaaggacttccag
ctcgactcctaccagtag
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