Cyclopterus lumpus (lumpfish): 117751665
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Entry
117751665 CDS
T09199
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117751665
04082 Neuroactive ligand signaling
117751665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117751665
Ion channels [BR:
clum04040
]
Ligand-gated channels
GABA-A
117751665
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
117751665
NCBI-ProteinID:
XP_034419499
Ensembl:
ENSCLMG00005021657
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All DBs
Position
22:complement(13007589..13018880)
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AA seq
477 aa
AA seq
DB search
MQVDAVLVLFCVWLAGAAGRIPQSRGNKLETYKQSRSRRETSMDGDGGPRSGNPIYKRSP
DMTKSLMTKSEQLLRIDDHDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTMTLYLR
HYWKDERLSFPSTNNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGN
VLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDDRISL
SQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWI
DRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAV
NYLSTVQERKERKLRERLPCTCGIGNPDEMMIDPQITGYGSMDVNTTGNYGMPENGGRQD
RMLSQVSLNDPQITGQVRPSRGYVNIWIDTHAIDKYSRVLFPGAYILFNIIYWSIYS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggatgctgtccttgttctcttctgtgtttggctcgcaggtgcagctgggagg
attccccagtcgaggggtaacaagctggagacctacaagcagagcaggtcacgaagagag
accagtatggatggagatggaggtcccagatctggaaacccaatttacaagcgaagtcca
gacatgacaaaatctctgatgacaaaatctgagcaactcctgagaattgacgaccatgat
ttcaccatgaggccagcattcggaggtcctccaattcccgttggagtggatgttcaggtt
gaaagtctggacaccatctctgaggtggatatggacttcaccatgacactgtacctgcgt
cactactggaaggacgagcgtctgtctttcccgagcaccaacaaccagagcatgactttt
gacagtcgcctggtgaagaagatttgggttcctgacatgttctttgtccactccaagcgc
tcttttatccacgacaccaccaccgataacgtcatgctgagggtttaccctgacggcaac
gtcctctacagcctcagagtcactgtcaccgccatgtgcaacatggacctcagtcgcttc
cctctggacactcaaacctgctcgctggagatcgagagctatgcatacacagacgacgac
ctgatgttgtactggaagaaaggcaacgaatccctgaacacggacgacagaatatctctg
tcccagttcctcattcagaaatttcacaccaccaccaagctggctttctacagcagcaca
ggctggtacaatcgtttgtacatccacttcaccctgcggcgccacatcttcttcttcctg
ctgcagacctacttccccgctactctgatggtcatgctgtcctgggtttccttctggatt
gaccgccgggccgtccctgccagggtgccactaggcatcaccacagtgctgaccatgtcc
accatcattaccggggtcaatgcctccatgccgcgggtctcctacatcaaggcagtggat
atttacctctgggtcagttttgtctttgtcttcctgtcggtgatagagtacgcggcagtc
aactacctctccaccgtacaggagaggaaagagaggaaactgagggagagactgccgtgt
acatgcggcattggcaacccagacgagatgatgatcgacccccagatcacaggctacggt
tccatggatgtcaacaccacagggaattatgggatgccagagaacggcggtcgccaggat
cgaatgttgtcccaggtttccctgaatgacccgcagatcacaggccaggttaggccatcc
agaggctacgtgaacatctggatagacacccacgccatagacaagtactcaagggttttg
ttccctggagcgtacatcctctttaacatcatctattggtccatctactcgtaa
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