Cyclopterus lumpus (lumpfish): 117751694
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Entry
117751694 CDS
T09199
Name
(RefSeq) vacuolar protein 8-like
KO
K08332
vacuolar protein 8
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117751694
03029 Mitochondrial biogenesis [BR:
clum03029
]
117751694
Membrane trafficking [BR:
clum04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
117751694
Other autophagy associated proteins
Micronucleophagy
117751694
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117751694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
ZER1-like_2nd
HEAT
Motif
Other DBs
NCBI-GeneID:
117751694
NCBI-ProteinID:
XP_034419539
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Position
22:complement(19863970..19868215)
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AA seq
564 aa
AA seq
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MASGFCENCSRLLNELFLSLRKVCREFERKLRDVFRELSQCTCFRNTPESSFLRRKFSLH
LLCDDENQLLNQESLRTLSRLASSDDADLQTTAAVYYLHVSHHLKSPLPEAFLEPVMALL
LSADLDVQKTTTLSLVNLLAKNNVCRELVIEMGMLVPLLELFRSGDATARCHSCACVTLL
ASSESKSEAVTVDGVMPLLALAKSYEPRVQQNATWALLHLTQSDCSTRILCDVGAVPVLV
LLLQSSDSEVQFYSCAALCNIAAVRDHHPKLLSIGGHFLLKSLLTLVSSSVQKNSTRACR
CLRTLSKNVLIQEQLMELDCVLPLKALLKKSSPVWRESAVTLLSTLSAHPPNNDVLVSEG
LLDDIGQLLRHQTSVTIAHSCKIVSDLCVSSAGQQAATESLCLPALLGLLSSPSLSDETS
LHVTSCLHHLMTWDPLKSNLSATITSEHVSRLVKMSGQTQKPELSHDSAAIIGSLEMTQE
TVRMLRPHYVTVMEFLSVFLKNKDVKLQHLAIVTVSNLEKDGGFSSLLAGSELEALLREV
HAQTEETRRLLQMIKPLSPSSVHP
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggcttttgtgaaaattgctcccgtctgctgaatgaattgttcctttctttg
aggaaggtgtgcagagagttcgagcgaaaactcagggacgttttcagggaactttctcag
tgcacctgcttcaggaataccccggagagcagtttcctgaggaggaagttctctctccac
ctgctgtgtgatgatgaaaatcaactccttaatcaggagagtctgcgcacgctgagcaga
cttgcatcctcggacgacgccgatctacaaactactgcagccgtgtattatttacatgtc
agtcatcatttgaaatctcctttaccagaggccttcctggagcccgtcatggccttactg
ttatcagctgacctcgacgtgcaaaagactacaactctctccttagttaatctgttagcc
aagaataacgtgtgcagagagttggtgattgaaatggggatgctggtgcccttactggag
ctgttccggtcgggggacgccaccgctcggtgtcactcgtgtgcctgcgtcaccttgctg
gcttcctcagaatcaaagagtgaagctgtcacggtggatggcgtcatgccactgttggcg
ttagccaagtcctacgagccgcgggtgcaacagaacgccacctgggctctgttacacctc
acacagtcagattgttcgacgaggatcttgtgtgacgtgggagccgttcccgtcctggtg
ctcctgctgcagtcctcggattcagaggttcagttttacagctgcgccgctctgtgcaac
atcgccgctgttcgggaccatcacccaaagttgctgagcatcgggggacacttcttatta
aagtctctcctgactctcgtgtcttcctccgtgcaaaagaattcaactcgagcgtgcaga
tgcctacgaactctctcgaagaacgtgctgatccaggagcagctgatggagctcgactgt
gtgttgcccctgaaggcgctgctgaagaagtcttctcccgtgtggagagaatcagccgtc
acactactttccacactgtcggcacacccaccaaacaatgacgtcctcgtgagcgagggt
ctgttggatgacatcggtcagctgcttcgtcatcaaacatctgtcacaatcgcacacagc
tgcaagatcgtcagcgacctgtgcgtctccagcgcgggtcagcaggctgcgacggagagt
ctgtgtttaccggctctcctcgggctcctgtcgtccccgtcgctgtcggacgagacctcg
ctgcatgtgacgtcctgcttgcatcacctcatgacctgggatccactcaagtctaacttg
tcggcgacgataacatcggagcacgtttcgagacttgtgaagatgtccggacaaacccaa
aagcccgagttgtcccacgacagtgcggccatcatcggctcgctagaaatgacccaggag
acggtccggatgctgagacctcactacgtcaccgtgatggagttcctctcggtgttcctc
aaaaacaaagatgtgaagttgcagcatctcgccatagtgacagtatcgaacctcgagaaa
gatggaggcttctcctccctgctggccggcagcgagctggaggctctcctccgggaggtg
cacgcgcagacggaagaaaccaggcggctgctgcagatgatcaagcctctttctccatct
tctgtccacccgtga
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