Cyclopterus lumpus (lumpfish): 117751695
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Entry
117751695 CDS
T09199
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117751695 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117751695 (lrfn5a)
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GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_5
LRR_4
LRR_1
ig
Ig_2
LRR_9
fn3
C2-set_2
DHU1_N
Rop
Ig_5
Motif
Other DBs
NCBI-GeneID:
117751695
NCBI-ProteinID:
XP_034419540
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Position
22:6238032..6259755
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AA seq
861 aa
AA seq
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MERLLLCVMLAVAMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDKHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISFITPQAFTDLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLETIPWETIQRMISLHTLSLD
HNMLDFIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMTSTSFALSFGG
NPLHCNCELLWLRRLYREDDLETCASPQQLSGRYFWSVPEEEFLCEPPLITRYSHEMRVL
EGQRVTLRCKARGDPEPAIHWISPEGKLVSNSSRTLVYTNGTLDILISTVKDTGSFTCIS
SNPAGEAHQTIDLVIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRTIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTQYDLCVLAIYDDVITSLTATRVVGCVQFTTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGEGGKGVSLSMTNVHSQTNGQQSQGCTVTPSSSKHGSIGFD
DFSGGTKKRSGAAAGGELSKDTITQSSDSSLPDCSTTTSVLSQPWGARSPTAGADEERAQ
AGVSSPTGATGSLTKTKRKPAPGKPGAACSKALAPAENLPSDSHRPPSSSFTNASSALLH
SIPLENLNTNRNNSTSLNQNPYSVPPSPFSSPLATLSPVPSTRFRETPILRRAPRASASA
KYQTLPVEEAGRSRARRRYSLSEGGSKTHSPHQGAGGAPKVGRIMRNKRSQSMSGILLPK
DGDGDSEKGRCDSDWILESTV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggagagactcttgctgtgtgtgatgctggcagttgccatggcagtgcgggcgcagatc
tgcccgaagcgctgcgtctgtcagatcctgtcacccaacctggcgaccctctgcgccaag
aaaggtctgctgttcgtaccgccgaacatcgataagcacacagtggagctacggctggct
gacaactttgtcacaagtgtgaagaggaaagattttgcaaacatgacacggctggtggac
ctaacattatccagaaacaccatctccttcatcacacctcaagcctttaccgatttagaa
aacctcagagctctacacctcaacagtaaccggttgacgaggataggcaatgatacattc
agcgggatgtcgaagctacaccacctgattctgaacaacaaccagctggtgctgatccac
caaggagcgttcaacgacctgctggctctggaagaattggacctcagttacaacaacctg
gaaactattccttgggagaccatccagagaatgattagcctccatacgctgagtttagac
cacaacatgttggacttcattccagagggaacattttccctgctacagaaactcaaccgg
ctggacgtcacctctaataaactccaaaagctgccaccggaccctctttttcaacgagca
caggtcctggccacgtcagggatcatgacctccacttcgtttgcgttgtcattcggtggg
aaccctctccactgcaactgtgagttactgtggctgcggaggctgtacagggaggacgac
ctggagacgtgcgcctcaccccagcagctctctggccgatacttctggtccgtcccggag
gaggagtttctctgcgaacctccactcatcaccagatactcgcatgagatgagggtgctt
gaagggcagagagttacactcaggtgtaaggcaagaggtgacccagagccggcaatccac
tggatctcccctgagggcaagctggtatctaactcctccaggacgttggtctacaccaac
ggtactctggacatcctcatcagtacggtgaaagacacaggctccttcacctgcatctcc
tccaaccctgccggcgaagcccaccaaacaatagacctggtcatcataaaactcccccac
atctccaacaacaccaacaacatccaggagcccgacccaggatcgtcagacatttccacg
tcgacccgaggcggagccaacgggagcaacgtgacgggcgacgtgaaaggcggagtggac
aagcgggtggtgacggccgaggccacgtcctcgacggcgctgataaagttcaacttccag
aggactatccccggcatcaggatgttccagatacagtacaacgggagccaagacgactct
ctggtctacagaatgatcccgccgtcaagcaagaactttctggtcaacaacctggcggca
gggacccagtacgacctgtgcgttctggccatctacgacgatgtcatcacctctctgacg
gcgacgcgcgtcgtcggctgcgtgcagttcaccaccgagtcggagtacatgaggtgtcat
ttcatgcagtctcagttcctcggcgggaccatgatcatcatcatcggagggataatcgtg
gcttcggtgctcgttttcatcatcattctgatgatacggtacaaggtgtgtaaccctggt
gagggcggtaaaggcgtttcgttgtcaatgaccaacgtccactcacagaccaacgggcag
cagtcacagggatgcaccgtgactcccagctcctccaaacacggctcaatcggattcgac
gacttctcggggggcacgaagaagaggagcggcgcggcagcgggcggggaattgagtaag
gatacgataactcagtcgtccgactcgtccctgcctgactgctccacgaccacgtcggtt
ctcagccagccgtggggagccagaagtccgacagccggagccgacgaggagagagcgcag
gccggcgtctcgtcgcccaccggcgccaccggttctctgaccaagacgaagcggaagccc
gctccgggtaagccgggcgcggcttgctccaaagccttggcccctgctgaaaacctcccc
tccgactcccatcgccctccttcctcctccttcaccaatgcctcctcggctctcctccac
tccatcccgctggagaacctcaacaccaaccgcaacaactccacctctctcaaccaaaac
ccgtattccgtccccccttcccctttctccagccctcttgccaccctgagccccgtgccc
tccacccggtttcgagagacgccgatcctgcgcagggctccccgcgcctccgcctccgcc
aagtaccagactctccctgtggaggaggccgggaggagcagggcgaggaggaggtactcg
ctcagcgaaggaggctcaaagactcactcgccccatcagggagcaggaggagcgcccaaa
gtagggcgcataatgcgcaacaaaaggagccaatcgatgagcgggatcctactcccgaaa
gacggggacggagactcggaaaaagggcggtgcgattcggactggatcttagagagcacg
gtttga
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