Colletotrichum lupini: CLUP02_00635
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Entry
CLUP02_00635 CDS
T08561
Name
(RefSeq) KH domain-containing protein
KO
K13210
far upstream element-binding protein
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_00635
03041 Spliceosome [BR:
clup03041
]
CLUP02_00635
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
CLUP02_00635
Spliceosome [BR:
clup03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CLUP02_00635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_NusA_2nd
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
73334692
NCBI-ProteinID:
XP_049135639
UniProt:
A0A9Q8W7K7
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All DBs
Position
1:join(<2308069..2308213,2308287..2309761,2309818..2309983,2310039..2310151)
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AA seq
632 aa
AA seq
DB search
FSPPTRPDTLFSSLTSHNLTFDRALHSAYATATMAEPPRDISSILAALGAAQRGTSSTPT
QGQPGMPPSYPPPPGGQPPPSYPPMPQQNAPPYGGGGGYPGLPQPTSSGSLDLSSIRPVN
SGTVSIADAIAQAKAFAAEKGVASYDRPLVYSNEAPRGQDSRAYGRSSRSRSPSNRRDQF
RDNFNPYRDERRDDRPAPRDYGHRERSYSPGPRGRTFSPRNSNGRERSPLRGSGGGDDNA
ETIQIESSLVGLIIGRQGENLRRIESESNCRVQFLPSSDNGPFRQCKISGPRAQRSEVKE
AINRIIDDSGMGAINRGAANPKGPPPRDHRGGPPGASAAAAAAAAAGAGAAALRDGEDCM
QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGSRESAAQAKD
LIMEIVDSDSRNEGQPAAPTKKPQRHDGGGHQRDSAPMGGPGGGSGDKINDAIYVPSEAV
GMIIGKGGETIRDMQNGTGCKINVAQSSGPGEVQREIALIGSRDSIARAKQAIEEKVDAV
RQKNSGGGGGGRGRQNQDYDRSYSQQGSNPSASGSANPPAAQAPAGADGADPYAQYGGYQ
NYLALWYQSLVYQQQQGGGAAGQPGAAPPGAS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
ttcagccctccgacacgaccagatactcttttctcttctttgacaagtcacaatctgact
tttgatcgcgccctgcattctgcatacgcgacagccacaatggccgaaccacctcgtgac
atctcctccatcctcgctgccctaggcgcagcacaaagaggcacatcttcgacgccgacc
caaggacagcccggcatgccgcccagctatcctcctcctcccggtggtcagccgcctcct
tcctaccccccgatgccccagcagaacgcgcccccgtatggcggcggcggtggctacccg
ggactcccccagcctacatccagcggcagtctggatcttagctctatccgacccgtcaac
tctggcacagtcagcatcgccgatgccatcgcgcaagccaaggccttcgctgctgagaag
ggcgtggcatcctacgaccgacccctcgtctactccaacgaagccccccgcggccaggat
tctcgagcctacggccgatcctcgcggtcgcgctctccttccaaccgtcgcgaccagttc
cgcgacaacttcaacccctacagagacgagcgccgggacgatcgccctgctccacgagac
tatggtcatcgcgagcgatcctacagccctggcccgcgtggtcgcactttctctcctcgc
aactctaacggcagagagcgatctccgctgagaggaagtggcggtggtgacgacaacgcc
gagacaattcagattgagtcgagccttgttggtctcattatcggtagacaaggcgaaaac
cttcgtcgcatcgagtcagaatccaattgtcgggtgcagttccttccctccagcgataat
ggtcctttccgccagtgcaagatcagtggtcccagggcacagcgcagtgaagtcaaggag
gccatcaaccgcattatcgacgatagtggcatgggcgccatcaaccgtggcgctgcgaac
cccaagggacccccacctcgcgaccaccgcggcggaccacctggagcaagcgctgccgcc
gctgccgccgccgctgccggagccggagctgcagctcttcgcgacggtgaggactgtatg
cagattatggtacccgatagaaccgtgggcctgatcatcggtcgcggtggcgagaccatt
cgcgatttgcaggagcggtctggctgccacatcaatattgttggtgaatccaagagtgtc
aatggacttcgacctgtcaacctcatcggctctcgtgaatcagctgcccaagccaaggat
ctgatcatggagattgtggatagcgacagccgaaacgagggccaacctgcagcccccacc
aagaagccgcagagacacgacggtggtggtcatcagagagactctgcgcccatgggtgga
ccgggcggcggcagcggtgacaagatcaacgacgccatctacgtcccatccgaggctgtg
ggtatgattattggcaagggcggcgagaccatccgtgatatgcagaacggcactggttgc
aagatcaatgttgcccagtcctccggtccaggcgaggttcagcgcgagattgcccttatc
ggctcgcgcgatagtatcgccagagccaagcaggcgattgaagagaaggttgacgcagtg
cgccagaagaactctggaggcggtggcggtggtcgcggtcgtcaaaaccaagactatgat
agaagctactctcaacagggatctaacccatcagcatcaggatctgctaacccaccagct
gctcaagctcccgctggagccgacggagccgacccatatgcgcaatatggtggataccag
aactaccttgccctctggtaccagtcccttgtttatcagcaacaacaaggcggcggtgcg
gccggtcagcccggtgcagcgcctcctggagcctcatag
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