Colletotrichum lupini: CLUP02_00701
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Entry
CLUP02_00701 CDS
T08561
Name
(RefSeq) uncharacterized protein
KO
K15218
RNA polymerase I-specific transcription initiation factor RRN6
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_00701
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
CLUP02_00701
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn6_beta-prop
Rrn6_HB
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
73334758
NCBI-ProteinID:
XP_049135705
UniProt:
A0A9Q8SBA5
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All DBs
Position
1:join(2512462..2512483,2512540..2514553,2514603..2515866)
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AA seq
1099 aa
AA seq
DB search
MSRVPGQAQALRIIQAPETLYPASRSTELAPSSTLWDSQRVQRRWLFNAHPEAFAGSSEA
SSFLYEGLAQLMRPDAAPTTQPLMTISQMADVTNHTRVVPVPVLATAAGESGELLRLSKI
EETNWQWGENESPTLRMLSIDQHDKEESVLWSSDGAPILQIKPALSLVRFEPTRWLLVQK
RTSTTILQPDYHKIPVSERPSGIDQAIERPSRINPRPVLTISSEQTGGFAHSDVSFSYGS
QKKPPQLAIIDECGYYSVWDVKGRDMVGSSGLRPKLRHCGHIHLGVTEQLPDEDSPAFRA
EPHGVMWIGAAGPGVDLWDVPEGQDVDAGNDLAALTSRSKKLVIWNRVKFEIIDIKDSTF
RKSLVILKTDEPDHILDVKPNPLNRSQIFILTTSGFFWIETSSSGTTANKAGGLSILQSF
AHLRGSDADALRLTVHHGGSEAGNEKCTVFIYSDRSPEVDVYWFYAPEDTGLPQFEHHIM
KLTGDATKLQSLCPVPAFLRNPSPATAKGPGLEYLNHDIRFQQLFVLGRDLSLSQSLFAI
SAGPDLDVVAPDNSREWSRDGRRQAHNKRRRQFLQHFEGTFVVPDGLGDMDELVQRRANR
YQELMESEQAGEEAQLKQRWPRGLNLDQLVSRVNVSIESVIMASEQATIEGPLSVFEAIR
EAAVNCLETEGGYIPLHTLHEYENTFEAPPVSHEAVAAWDSRFQEMMNAQTDRVIAQPLT
SQFLHGLETLSPLADIRDQLEEMWSPAGLPPRAQQSRNVVLAETAEAIARSLFGVAVLDA
NLPTREDESPTWVPEPPPLPVRQPSQRSSQRFSSSPAKRSQLSSSQRLSLSPTKLSQPLS
QRISLSPTKRVQALGHRLSFSPSKGARSQPFDNVPPSSFPFPSSGPLFSQSSSAAPSSSF
PDAAPSTPTTPAPTTIATTALQRLSMLAEDINTADPPARQHKVLAYWPTARGVSTEGYVS
SVLASSTKHMDVLNERRHRAESRRRKRKSQFLGASSQHGWATSEMDDVFESSGPGSGPAT
KTKMQAATNTGSEFAPLLPPSTQPLPKLAPPVIGSSQFPPVPSSRAIFSSQMPLVMSQPM
AGRHGMRSPGKKKKRKSGF
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggtgccaggtcaagcccaagctcttcgtatcatacaggctcctgagaccctt
taccctgcctctcgctcaacggagctggcgccttcttcaacactttgggattcccagcga
gtgcaaagacgatggctcttcaacgctcacccagaggctttcgcgggcagctccgaagct
tccagctttctgtacgaaggactcgctcagctcatgcggcctgatgccgcgccgacgact
cagccacttatgacaatcagtcagatggcagatgtcaccaatcacacgcgggtcgtgccc
gtccccgtactggccacggctgccggcgagtcgggtgagctcctccgtctgtccaagatt
gaggagacaaactggcaatggggcgagaacgagagcccaacgcttcggatgttgagcatc
gaccagcacgacaaggaagaatctgtcttgtggtcgagcgatggagccccgattctgcag
atcaagcctgcgctgagcttggtccggttcgaacccacgaggtggctgctggtgcagaag
cggacttcgactaccattcttcagccggattaccacaagattcctgtttcagaacgcccg
tcggggattgaccaggctatcgagcgcccatctcgaatcaacccgagacctgtcctcacc
atctcctcggagcagactggaggctttgcgcattctgatgtgtctttcagctatggctcg
cagaaaaagccgcctcagctggccatcatagacgagtgcggctactacagtgtctgggat
gtcaagggtcgagacatggtgggatccagcggcttgcgtccaaagctccggcattgtggc
cacattcacttgggtgttacggagcagctccccgacgaggactcgccggctttccgcgca
gagcctcatggcgtgatgtggatcggcgcggccggcccgggtgtagatctttgggatgtg
cccgaagggcaagatgtcgatgcaggaaacgacctggccgccctgacgtcgaggtccaaa
aaactcgtcatctggaaccgcgtaaaattcgagatcattgatatcaaagactcgacgttc
cgaaagagcttggtcatactcaagacggacgagccagaccacatactagacgtgaagcca
aatcccttgaacaggagtcagatcttcatcctcacgacctcgggtttcttttggatcgag
acgtcgtcttcagggacgacagccaacaaggcaggcggactctccattctgcaatccttt
gcacacctcaggggctcggatgcggacgctctcaggctcaccgtgcatcacggcggttcg
gaagcaggaaacgaaaaatgcacagttttcatctactctgacagatctccagaggtagat
gtttactggttttacgcgcctgaagacacgggattgccacagtttgagcaccatatcatg
aagctcacgggcgacgcgacgaagcttcagagtttgtgcccagtgccggctttcctgaga
aacccctcccctgcaacagccaagggcccaggcttagagtacctcaaccatgacatccga
ttccagcagctgttcgttcttggcagggacctcagcttgagccagagcctctttgcgatc
tcggccggccctgatctcgatgtggtggctcccgataacagtcgcgagtggtcaagagac
gggcgcagacaggcgcataacaagaggcgacgacagttcctgcagcattttgaaggtact
tttgtcgttcccgatggcctgggtgatatggatgagctggtgcagcgccgcgccaatcgg
taccaggagctcatggagagtgagcaggcaggagaggaagcacagcttaagcagcggtgg
cctagaggtctgaacttggaccagctcgtatcccgcgtcaatgtttccatcgagtcggtc
atcatggcgtcagagcaagctaccattgagggtcctctgtctgtatttgaagccatacgg
gaagcagccgtcaactgtctggagactgagggcgggtacatcccgctgcacactttgcac
gaatacgaaaacacctttgaggcgcctcctgtctcccatgaggcagtagcagcgtgggac
tctcgcttccaggagatgatgaacgcgcagaccgatcgtgtcatcgcacaacctctcacg
tcgcaatttctacacggcttggaaacattgtcacccctcgcagacatccgcgaccagctc
gaggagatgtggagtccagcgggcctcccgcctagagcacagcaatcacggaatgtcgtg
ctagcagagacggccgaggccatcgctcgatccctcttcggtgtggccgtactcgacgcg
aacctcccgaccagagaagacgagtcccccacctgggttcccgaacctccaccactacca
gtccggcagccgagccaacgctcaagtcagcgcttctcatcgtcacccgcaaagcgtagc
caactatcgtcaagccagcgactctcactctctccgaccaaactaagccagcccctaagc
cagagaatttctctatcgccaaccaaacgcgtccaagccctcggccaccgcctctccttc
tccccttccaaaggcgcccgctcccagccctttgacaacgttcccccctcatcgttcccc
ttcccctcctcggggcccctattctcccagtcctcctccgccgccccctcctcgagcttc
cccgacgccgccccatcaacaccaacgacacccgcacccaccacaatcgcaaccacggct
ctccagcgcctgagcatgctcgccgaagacatcaacaccgcagacccccccgcccgccaa
cacaaagtcctcgcctactggcccacagcccgcggcgtcagcacggaaggctacgtctcc
tccgtcctcgcctcctccacaaagcacatggacgtcctcaacgagcgccgccaccgcgcc
gaatcgcgccgtcgcaagcgcaagtcgcagttcctcggcgcgtcgtcgcagcacgggtgg
gcaacgagcgagatggacgacgtgttcgagtcatctgggcccgggtccgggcccgcgacg
aagacgaagatgcaggcggcgacgaacaccgggtccgagtttgcaccgctgttgccgccc
tcgacgcagcctcttcccaagcttgcgccgcccgtcatcggctcgagccagtttccgccc
gtgccgtcttctcgggctatcttctcgtcgcagatgccgctcgtcatgtcgcagcccatg
gctgggaggcacgggatgcggtcgccggggaagaagaagaagagaaagtctggtttctaa
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