Colletotrichum lupini: CLUP02_00851
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Entry
CLUP02_00851 CDS
T08561
Name
(RefSeq) helicase associated domain-containing protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clup03041
]
CLUP02_00851
Enzymes [BR:
clup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CLUP02_00851
Spliceosome [BR:
clup03041
]
Complex C
Other components
Complex C specific factors
CLUP02_00851
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
DEAD
AAA_23
AAA_30
AAA_19
T2SSE
nSTAND3
AAA_7
AAA_29
Cas3-like_C_2
Zeta_toxin
ESP
Motif
Other DBs
NCBI-GeneID:
73334907
NCBI-ProteinID:
XP_049135854
UniProt:
A0A9Q8SBU7
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All DBs
Position
1:2979850..2981991
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AA seq
713 aa
AA seq
DB search
MADFDLNSAFIPALHKPSALLPIAKHRQALLYLIETKQVTIVVGQTGSGKTTQIPQFLEA
AGWCADGKVIGITQPRRVAATTVALRVAEEVGCEIGQQVGYAIRFEDNTSAQTRIKFMTD
GLLIREALVDPLLTRYSVIMVDEAHERSISTDILLGLLKKILKKRPELRIIISSATLQAE
EFLKFFTTSPGDEQKKTVTAPEDKDGKADAADDNEKGAIISLEGRAHHVDVLYLESPTED
YVEKAISTVFDIHTTESEGDILVFLTGREEIDNAVQAVADRLLDPNQPRGQQTLQALPLY
AGLSTEQQMYVFDKPPEGTRKVVFATNMAEASITIDGIVYVIDTGFAKLRAYNPRTGIEI
LTSTAISKASASQRAGRAGRTRPGKCFRLYTEDAYLALPEVTVPEMQRSNLAPFILQLKA
LGIDNVLRFNFLSPPPAELMAKALELLYSLGALDDYAKLTKPLGYRMAELAVEPMMAKIL
LGAQSFGCLSEMLTIAAMTSAGGNNVWFHHDGERQQMELSRRKFAADEGDHLTLLNAYQA
FVTKGRKESKFCRDHNLNFKTMTRAVSIRGQLKRYLEKFGIATDNEQQQQQSFGPASSRQ
QHQQKHDNSTKAEQIRRCLTTGYFAHAARMQPDGTFRNVSGETTLHAHPSSLMFNRKADW
VIFHEVMETANKIFIRDITKIEKNWLVEYAPEFYQLSDSSARRARDEAEAETL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcgatctcaactcggccttcatcccggccctgcacaagccgtcggccctc
ctccccatcgcaaagcaccgccaggcccttctttatctcatcgagaccaagcaggtcacc
atcgtcgtcggccagaccggctccggcaagaccacgcagatcccccagttcctcgaagcc
gcgggatggtgcgcagacggcaaggtcatcggcatcacgcagccgcgccgcgtggcggcg
acgacggtcgcgctccgcgtcgccgaggaggttggctgtgagattggccagcaggtcggc
tacgctatccggttcgaggacaacacctcggcgcagacgcgcatcaagttcatgacggac
gggctgctcatcagggaagcacttgttgaccccttgctgacgcggtactctgtcatcatg
gttgacgaagcccacgaacgttccatcagcactgatatcctcctgggactactcaagaag
attctcaagaagaggcctgagctgcgcatcatcattagcagtgcaacactacaggctgag
gagttcttaaagttcttcacgacctctccgggggacgagcagaaaaagacggtcaccgct
ccggaggacaaggatggaaaggccgatgccgctgacgacaacgaaaagggtgcaattatt
agcttggagggcagagcacatcacgtcgacgtcctctatctagaatcaccaacagaggac
tacgtcgaaaaggcaatctccacagtcttcgacatacacacgacagagtccgaaggcgac
atactcgtcttcctcacaggccgtgaagaaatcgacaacgccgtccaagccgttgccgac
cgcctgctcgacccgaaccagcctcgcggccagcagacactacaagcgctgcccctatac
gcgggtctctcgacagagcaacaaatgtacgtctttgataagcctcccgagggcacgcgc
aaggtcgtcttcgccaccaacatggccgaggcctccatcacaatcgacggcatcgtctac
gtaatcgacacgggcttcgccaagctgcgcgcctacaacccgcggacgggcatcgagatc
ctcacctcgaccgccatctcaaaggcctcggcgtcccagcgcgccggccgcgcgggacgc
acccgaccgggcaaatgcttccggctctacacggaagacgcctacctcgccctccccgag
gtcaccgtccccgagatgcagcgctccaacctggcgccctttatcctgcaacttaaagcc
ctcggcatcgacaacgtcctgcgcttcaacttcctcagcccgccgccggcagagctcatg
gccaaagccctggagctcctctactccctgggcgccctcgacgactacgccaagctgacg
aagccgctgggctaccgcatggctgagctggccgtcgagccgatgatggcaaaaattctg
ctcggcgcgcagtcgtttgggtgcctgagcgagatgctcaccatcgcggccatgacgagc
gccggcggaaacaacgtctggttccaccacgacggcgagaggcaacagatggagctgtcg
cggcgcaagttcgccgccgacgagggcgaccacctgacgctgctcaacgcctaccaggcc
tttgtgacaaagggcaggaaggagtcaaagttctgccgggaccacaacctcaacttcaag
accatgaccagggccgtcagcatacggggccagctgaagcggtacctcgaaaagttcggc
atcgccaccgacaatgagcagcagcagcagcagtccttcggccccgcgagctcacggcag
cagcatcaacaaaagcacgacaactccacaaaggcggagcagatccggcggtgcctcacg
acgggctactttgcgcacgcggcgaggatgcaaccggacggcacgttccgcaacgtctcg
ggcgagacgacgctccacgcgcaccccagctccctcatgttcaaccgcaaggccgactgg
gtcatcttccacgaggtcatggagacggccaacaagatattcatacgggacattacaaaa
atcgaaaagaattggctggtggagtacgcgcccgagttctaccagctgtcggacagttcg
gcgcggcgggctcgcgacgaggctgaagctgaaacgctatga
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