Colletotrichum lupini: CLUP02_01039
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Entry
CLUP02_01039 CDS
T08561
Name
(RefSeq) transcription initiation factor IID
KO
K03127
transcription initiation factor TFIID subunit 13
Organism
clup
Colletotrichum lupini
Pathway
clup03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLUP02_01039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_01039
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CLUP02_01039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID-18kDa
Bromo_TP
Transcrip_reg
CBFD_NFYB_HMF
CENP-S
Histone
Motif
Other DBs
NCBI-GeneID:
73335092
NCBI-ProteinID:
XP_049136039
UniProt:
A0A9Q8SBL6
LinkDB
All DBs
Position
1:complement(join(3635148..3635620,3635696..3635846,3635985..3636125))
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AA seq
254 aa
AA seq
DB search
MWPELGALHQPRLDVGAPPPQPAGVLDKAQNLRLRKVPYLIATLQAESPFESVQSEYNEN
QKHLALHDRIIRNYLSIMEPRARAAKNVGKMNFSHNELAQLLYAHGDVRNPLPETIRVLD
EIVTEFIQGMAFEATRAANYAGRQKVKYEDFEFAFRKNDAFLGKVQEVFEKKGEIESAKK
IFTKDDEAVLMKDAADQEHGKKDKAANGTGEASSAADAAVKQEEELGEADDDADAESEVA
GRPSKRVRLDGDGK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctgagcttggagctctgcatcagccacgtttggatgtcggagcgccaccccca
cagccagcaggggtgctggacaaggcccagaacctgaggctcaggaaggtgccttatctt
atcgcaaccctgcaagctgagagccctttcgaatccgtccagagcgaatacaacgaaaat
cagaaacatcttgcccttcacgatcggataatcaggaattacctgtccatcatggagcct
cgcgcccgcgccgccaaaaatgttggcaaaatgaacttcagccacaacgagctggctcaa
ctactatacgcccacggcgacgtaaggaatccgctccccgaaacgattcgcgtgctcgac
gagatcgtaaccgagttcatccaaggcatggccttcgaggcgacgcgcgcagccaactac
gcgggaaggcagaaggtcaaatacgaggactttgaattcgcgttccgcaagaacgacgcc
tttctcggaaaggtccaggaggtctttgagaagaagggcgagatcgagtcggccaagaag
attttcacaaaggacgacgaggcggtgctcatgaaggacgccgcggaccaggagcacggc
aagaaggataaggctgccaacggtacgggcgaggcttcgagtgcggcggacgcggcggtg
aagcaagaggaggagctgggcgaggccgacgacgacgctgatgccgaaagtgaggtcgcg
ggacgaccgtcgaaaagggtcagattggacggggacgggaagtga
DBGET
integrated database retrieval system
