KEGG   Colletotrichum lupini: CLUP02_01104
Entry
CLUP02_01104      CDS       T08561                                 
Name
(RefSeq) transcription factor tfb4
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
clup  Colletotrichum lupini
Pathway
clup03022  Basal transcription factors
clup03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CLUP02_01104
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLUP02_01104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clup03021]
    CLUP02_01104
   03400 DNA repair and recombination proteins [BR:clup03400]
    CLUP02_01104
Transcription machinery [BR:clup03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CLUP02_01104
DNA repair and recombination proteins [BR:clup03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CLUP02_01104
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 73335156
NCBI-ProteinID: XP_049136103
UniProt: A0A9Q8W8B6
LinkDB
Position
1:3816386..3817480
AA seq 364 aa
MNAVDASDHYEVSSHEATPSLLSIVIDTNPRAWAALNDILPLSKAIANILVFVNAHLAFS
NANQVAIIASHSNRAVWLYPSKPGAATNGSANSEDVAMTGIDSFAPTPNQSSANKFPQFA
QIEAAVMAAMRQLVDATTEADLACTTTQLSGALTLALTHINKTSLSLNETNKAPDVARPT
SSALSRLRARIFILSVSDSEPVQYISTMNAVFAAAHSQIPIDTLALSGDATFLQQASYIT
DGTFMQAASPHGLLSYLMFAYSADAEARSSLIPPTHHTVDFRAACFCHGRVVDTGFVCSI
CLSIFCDVPENSECLTCGTKLSLGSYGAKPAVIPRRKKKKKKTVLANGHIREETGSAAGT
PRPG
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgaacgccgtcgacgcttcagaccactacgaggtctcctcacacgaggccaccccttcc
ctcttgtccattgtcatcgacacgaaccctcgagcctgggccgccctcaacgatatcctc
ccactttcaaaagccatcgccaacatcctggtcttcgtcaacgctcacctcgctttcagc
aatgcgaaccaggtcgccatcatcgcctctcacagcaaccgtgccgtatggctctaccct
tcaaagcctggcgccgccacaaacggcagcgcaaactctgaagatgtcgcaatgacgggc
atcgactcctttgcgccgacccccaaccagtcttcggccaacaagttccctcaattcgcc
cagatcgaggctgccgtcatggccgcgatgcgccagctggtcgacgcaactaccgaggcc
gacctagcctgcacgacgacacagctctcaggcgccctcaccctcgccctcacacacatc
aacaagacctctctctcgctcaacgagaccaacaaggcccccgacgtggcccgcccgacc
tcctccgccctcagccgcctccgcgcccgaatctttatcctctccgtctccgactcggag
cccgtccagtacatctccaccatgaatgccgtcttcgccgccgcccactcccagatcccc
atcgacaccctcgccctgtccggcgacgcaaccttcctccagcaggcgagctacatcacc
gacggcaccttcatgcaagccgccagcccacacggcctcctcagctacctcatgttcgcc
tactccgccgacgcagaggctcgctcttccctcatcccgccaacccatcacaccgtcgac
ttccgcgccgcctgcttctgccacggccgcgtcgtcgacacgggcttcgtctgcagcatc
tgcctcagcatcttctgcgacgtgcccgaaaactcagagtgcctgacctgcggcacgaag
ctctctctcggcagctatggcgccaagcctgccgttataccgcggaggaaaaagaagaag
aagaagacggtcctggccaacggccatatcagggaggaaacgggcagtgcggcgggcacc
ccccgtccaggataa

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