Colletotrichum lupini: CLUP02_01126
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Entry
CLUP02_01126 CDS
T08561
Name
(RefSeq) IKI3 family protein
KO
K11373
elongator complex protein 1
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clup03016
]
CLUP02_01126
Transfer RNA biogenesis [BR:
clup03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
CLUP02_01126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
73335178
NCBI-ProteinID:
XP_049136125
UniProt:
A0A9Q8SC41
LinkDB
All DBs
Position
1:complement(join(3895551..3897231,3897284..3897626,3897692..3898480,3898539..3899449,3899502..3899528,3899599..3899667,3899774..3899958))
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AA seq
1334 aa
AA seq
DB search
MRNLRNIRFSAWEQQQEADPSAVTACCWDPAKDELLCATGPTEAKATIELVRLSDHHQQQ
QMLFYPHVIQVISWNLARFDITSRFFHILKELKRWDAPSPSPDLPADRVVSIHHFSDTLT
TCVILEGGDIVTIQEDDDSTDVQIEIVGSIDAGIAAARWSPDEELLVVVTKEGNAVFMGR
TFDPIADVVMTADDLKLSKHVSVGWGKKETQFQGKGAKAMRDPTIPEKVDEGLPSVNEDG
SAAVSWRGDGAYVAVNSVAGGARRVVRVYSREGVLDSVSEPVDHLEGGLSWRPSGNLIAG
IQRFENRTDVVFFERNGLRHGQFTLRCADGPLSAHEKIRLEWNSDSTVLAVILCDRIQLW
TTGNYHWYLKQEIPLASAFAGLAWHPEKPLRFVSATTTIVNVAEYIFTVSRGSLSPPHDH
GAVAVIDGQTLKLTPFRTAQVPPPMALFELEFPSSVLDIVFDPSNKLMAVLHRRGLDVYE
WQTKGEQSVKPTPMAKLEFEADTHTRVPLQVAFSGAAECRVLVSDGGLKLEGYTIEAGSI
KASGAVQLRPTEAISSLFSREGDSGTEACAQDRSGKLYSVAGTQAPELLLGTQLSMQLPW
CELHNINGRSVGIGMTRNGHLYANSKQLAKNCTSFVVTPAHIIFTTNNHLVKFVHLVDPE
EMEVPGDDPEIDERCRSIERGARLVTATPTNMNLVLQMPRGNLETIFPRAMVVAGIRQLV
DEKDYGRAFAFCRTQRVDMNILYDHQPSQFLSNVGLFLDQLKDISYIDLFLSSLRDEDVT
QTMYKDTKRSARSFEPSTETPAPADASPKSKVNKICDAILKSLQAKKSTTLQNIITAHVC
KVPPALEDGLTLVAELMQEDEKLAEKAVEHICFLVDVNRLYDNALGLYNLDLALLVAQQS
QRDPREYLPFIQNLHNLPDLRRKFEVDDHLDRRAKALLHLKALDAFDELCRYTTKHALYQ
DALGLYRYDQARHQTLTGLYASYLESNSKYRDAGLAYETLQNFAKATSCYRAAGVTCWRE
SLFAAQQQSPPPSEEALAELASSLADALWEGKEYAAAATIHADYLASLETAVKCLCKGYH
FAEALRLIARERRADLMPTVFDNGLVEALSSSTEFLADCKAQLLAQVPRIAELRRKAAED
PLAFYEGERPGGTGVDIPDDVSVATSRVSTSASLFTRYTGKDGSIGTAGTGVSRATSKNR
KREEKKRARGRKGTVYEEEYLVNSVRRLVERVEGGAKDEVGRLVFALVRRGMTERARAVE
VLVAEVVEGCKAAVREVFAVKETEQEGGVVVGLDGETYLASGGDAVLQEHLEARTKKMEP
PALSAFQKLTLLGS
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttgcgcaacatccgattcagcgcttgggagcagcagcaagaggccgacccc
tcggcggtgaccgcctgctgctgggaccccgccaaagacgagcttctctgcgcgactggg
ccgacggaggcgaaagccaccattgagctggtgaggctgtcggaccaccaccagcaacag
caaatgctgttttacccccatgttatccaggtcatttcctggaatttggcccgatttgat
atcacgtcccggttctttcacatactgaaggaactcaaacgttgggatgcgccgagtccc
agcccagacctgcccgcggacagggtcgtcagcatccatcacttcagcgacactctcacc
acctgcgtgatcctcgaaggtggtgatattgtgaccattcaggaagatgatgacagcacc
gacgtccagatcgagatcgtagggtccatcgacgccggcatcgccgccgcgcggtggtcc
ccggacgaggagctcctcgtcgtcgtcaccaaggaaggcaacgccgtcttcatgggccgg
acctttgaccccatcgccgacgtggtcatgacggccgacgacctcaagctctccaagcac
gtgtccgtcggctggggaaagaaggagacgcaatttcagggcaaaggcgccaaggcgatg
cgcgacccgacgatccctgaaaaggtcgacgagggcctgccgagcgtcaacgaggacggg
tccgcggccgtcagctggcgtggcgatggcgcgtacgtcgccgtcaactctgtcgctggc
ggcgcgaggcgggtcgtgagggtgtactcgcgtgagggcgtgctcgacagcgtcagcgag
cccgtggaccacctcgagggcggattgagctggaggccgtcgggaaatttgattgcaggt
atccagagattcgagaaccggaccgacgtcgtcttttttgagaggaacggtctgcgtcat
ggacaatttacgctgcggtgcgccgatgggcccctgagcgcgcacgagaagatccggttg
gagtggaactcggattcgacagtcttggctgtgattctttgtgacaggatacaactgtgg
acgacgggcaactatcactggtatctcaagcaggagatcccactggcgtctgcgtttgct
ggtttggcgtggcatcccgagaagccgctgcgtttcgtctccgcaaccacaactattgtg
aacgtggccgagtacatattcactgtctcccgcggatccctcagccctcctcatgaccac
ggagccgtcgccgtcatcgacgggcagactctcaagctcacgcccttccggacggctcag
gtacccccgcccatggccctcttcgagctcgagttccccagcagtgttctggacatcgtc
tttgacccgagcaacaagctcatggcggtgttgcaccgaaggggattggacgtctatgaa
tggcagacaaagggggagcagtcagtcaagcccacgcccatggccaagcttgagttcgag
gcggatacccatacccgtgtgcctttgcaggttgccttctccggcgccgcagagtgccgc
gtccttgtctccgacggaggtctgaagctcgagggctacacgatcgaagcaggctccatc
aaggcttcgggggctgttcaacttagaccgacagaggctatctcgtcgctgttcagccgc
gagggagactccggtactgaagcctgtgcccaagaccgctctggaaagctgtattcggta
gctggtacccaagcccctgagctgctgttgggaacacagctgtcgatgcagctgccgtgg
tgcgagctgcacaatatcaatgggcgcagtgtagggattggaatgacgaggaacggccac
ctctatgcaaactcgaagcagttggcgaagaactgtacctcttttgtcgtcacccctgca
cacatcattttcacgaccaataaccaccttgttaagtttgtgcatctggtagaccctgaa
gagatggaggttcctggagatgatccagagatcgacgagagatgccgaagcatcgagcga
ggcgcccgcctcgtgacagccacgccgaccaacatgaacttggtcctccagatgccgaga
ggtaacctggagaccattttcccccgcgccatggttgttgcgggcatcaggcagctcgtc
gacgagaaggattacggcagggccttcgccttttgccgtacgcagagggtggatatgaac
atcctttacgaccaccagccaagccagttcctgtccaatgttggtctcttccttgaccag
cttaaggatatttcctacattgatctgttcctgtcatctctcagggacgaggacgtcacg
cagacaatgtacaaggacacaaagcgctcggcaagatcattcgagccctcaacagagacg
ccagcaccagccgacgcctctccaaagtccaaggtcaataagatctgcgacgccatcctc
aagagcctccaggccaaaaagagcacgaccctgcaaaacatcatcaccgcgcacgtctgc
aaggtcccgcccgccctcgaagacggcctcaccctcgtcgcggaactcatgcaggaggac
gagaaactcgccgaaaaggccgtcgagcacatctgcttcctcgtcgacgtcaaccgcctc
tacgacaacgccctcgggctgtacaacctcgacctcgccctgctcgtcgcccagcagtct
cagcgcgatccgagggagtacctccccttcatccagaacctgcacaacctccccgaccta
cgccgcaagttcgaggttgacgaccacctcgaccgcagagcaaaggccttgctgcacctc
aaggccctcgacgcctttgacgagctatgcaggtacaccaccaagcacgcgctctaccag
gacgccctcggcctctaccgctacgaccaggcgcgccaccagacccttacggggctgtac
gcgagctacctcgaatcgaactcaaagtaccgcgacgccggcctcgcctacgagacgctg
cagaacttcgccaaagccaccagctgctaccgcgcagccggcgtgacatgctggcgcgag
tccctcttcgcagcacaacagcagtccccgccgccgtcggaagaagccctcgcggaactc
gcctcgtccctggccgacgccctctgggaaggcaaagaatacgccgccgcggccaccatc
cacgcagactacctcgcctccctcgagacggccgtcaagtgtctctgcaagggctaccac
ttcgccgaggccctccgcctcatcgcccgcgagcgccgcgcagacttaatgccgaccgtc
ttcgacaacggccttgtcgaggccctgagcagcagcaccgagttcctcgccgactgcaaa
gcccagcttctggcgcaggtcccccgcatcgcggagctccgccgcaaagcggccgaggac
ccgctcgcgttctacgagggggagcgacccggcggcacgggcgtcgacatcccggacgac
gtctccgtcgctacctcacgcgtgagtacctcggcgagtctgttcacgcggtacacgggt
aaagacgggagcatcgggacagctggcacgggcgtgtcgcgcgcgacgtccaagaaccgc
aagcgcgaggagaagaagcgcgcgcgtggaaggaagggaacggtctacgaggaggagtac
ctcgtcaacagcgtccggcgacttgtcgagcgcgtcgagggcggtgccaaggacgaggtt
ggaaggctggtctttgcgctcgtgagacggggtatgacggagcgcgcgagggctgtcgag
gttctcgtggccgaggtcgttgaagggtgtaaggctgccgtgcgcgaggtgtttgccgtc
aaggagaccgagcaggagggtggtgttgttgtcgggcttgacggggagacgtaccttgct
tctggcggggatgccgtgctccaggagcaccttgaggcgaggacgaagaagatggagccg
cctgcgctgagtgcctttcagaagttgacgttgctggggtcatga
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