Colletotrichum lupini: CLUP02_01172
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Entry
CLUP02_01172 CDS
T08561
Name
(RefSeq) BING4CT domain-containing protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clup03009
]
CLUP02_01172
Ribosome biogenesis [BR:
clup03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CLUP02_01172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
EIF3I
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
B-prop_COPA_B_2nd
Beta-prop_Vps41
WD40_Gbeta
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
WDR54
Motif
Other DBs
NCBI-GeneID:
73335224
NCBI-ProteinID:
XP_049136171
UniProt:
A0A9Q8SBT6
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Position
1:complement(join(4013608..4014579,4014637..4015332))
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AA seq
555 aa
AA seq
DB search
MDIDTPETQTISRRDNPHSNGAVQVKRRTDLVPREEREKIRRLKEANKSYGRGKSVNMKS
IKDKKLRTNLSKLENKYRDATIKAKDAEILLENSSGFLEPETELERTYKVRQDEITEGVS
VTTAQKRFELKLEELGPYVGEYTRNGRELLLAGRKGHLATFDWREGKLGCEIQLNETIRD
VRWLHNNQFFAVAQKKYVYIYDHNGVEIHCLRKHMEVTHMEFLPYHFLLGTVASTGFLKY
QDVSTGDIVSEIPTKLGPPTAMTQNPWNAVFHVGHQNGTVTLWSPNQTDPLVKLLAHRGP
VRSLAVDREGRYMVSTGQDCKMAVWDIRMFREVNQYFTRTPASSVAISDSGLTAVGWGTQ
TSVWKDLFNKNIPVQEKIQSPYMALGGEGRRVERVRWCPFEDVLGTGHDEGFSSHLIPGA
GEANFDALEVNPFETKKQRQEAEVKGLLNKLKPEMIALDPNFIGNIDLRSAAQRKAEKDL
DAKPLSVEEEIKNRARGKNGALKKYLRKQRKKNIIDEKRMKVDEIWEKRKKERESKNQEA
EADLGPVLSRFARKE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgacacacccgagacgcagacgatatcgcggagggacaacccgcactccaat
ggcgccgtgcaggtgaagcgccgcaccgacctcgtcccgcgcgaggagcgggagaagatc
cggaggctcaaggaggcgaacaagtcgtacggccgcggcaagagcgtcaacatgaaatcg
atcaaggacaagaagctgcgcaccaacctgtccaagctcgagaacaagtaccgcgacgcc
accatcaaggccaaggacgccgagatcctactcgagaacagcagcggcttcctcgagccc
gagacggagctcgagaggacgtacaaggtccgccaggatgagatcaccgagggcgtctcc
gtcacgacggcgcagaagcggttcgagctgaagctggaggagctgggaccgtacgtcggc
gaatacacccgcaatggcagggaattgctgcttgcgggacggaaaggtcaccttgcgacg
tttgactggagggagggcaagctgggatgtgagattcaactcaacgaaactattcgagat
gtgcggtggctgcacaataaccagttcttcgctgttgcgcagaagaagtatgtctacatc
tacgaccacaacggtgttgagatccactgcttgaggaaacacatggaggtcacacacatg
gagttcctcccctaccatttcctcctgggcacagtggcatcaacaggtttcctcaaatac
caggatgtttcgacaggcgacatcgtctccgagatccccaccaagctcggccccccaaca
gccatgacccaaaacccctggaacgccgtattccacgtaggacaccagaacggcacagtc
actctctggtcacccaaccagaccgaccctctcgtcaagctcctggcgcacagagggccg
gtaagatcactagccgtcgaccgcgagggtcgatacatggtctccaccggtcaagactgc
aagatggccgtctgggacatcaggatgttcagagaagtgaaccagtactttacaagaaca
cccgcatcctcagtagccatctccgactcgggtctgacggccgtcggttggggcacacag
accagcgtctggaaggacctgttcaacaagaacatacccgtccaggagaagatccagagc
ccgtacatggctctcggaggcgaaggcagacgcgtcgagcgcgtgcggtggtgccccttc
gaggacgtcctcggcacgggccacgacgagggcttctcctcgcacctcatccccggcgcc
ggcgaggccaactttgacgccctcgaggtcaaccccttcgagactaagaagcagagacag
gaggccgaggtcaagggcctgctgaacaagctcaagcccgagatgattgccctggacccc
aacttcatcggcaacattgacctgcgctcggctgcgcagcgcaaggccgagaaggacctg
gacgcgaagccgctgtccgtcgaggaggagatcaagaaccgcgccaggggcaagaacggc
gcattgaagaagtacctgcgcaagcagaggaagaagaacatcattgacgagaagaggatg
aaggttgatgagatctgggagaagcgcaagaaggagagggagagcaagaaccaagaggcg
gaggctgatctcggcccggtgttgtcgaggttcgcgcgcaaggaataa
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