Colletotrichum lupini: CLUP02_01478
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Entry
CLUP02_01478 CDS
T08561
Name
(RefSeq) uncharacterized protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clup03009
]
CLUP02_01478
Ribosome biogenesis [BR:
clup03009
]
Eukaryotic type
90S particles
Other 90S particles
CLUP02_01478
Pre-60S particles
Other pre-60S particles
CLUP02_01478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
TPR_Trm732_C
TOR1L1_N
TPR_IPO5
DinB_2
DUF3483
Motif
Other DBs
NCBI-GeneID:
73335528
NCBI-ProteinID:
XP_049136475
UniProt:
A0A9Q8W9B9
LinkDB
All DBs
Position
1:complement(join(4921467..4925192,4925249..4925317))
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AA seq
1264 aa
AA seq
DB search
MSTPTLAEKLDKIRSPGLQSQKRTAVVLEAVDTTLKEQNAQPTPTGYFAALLGLLTQAVE
SGNISSDTTTSVVYLLDIVTPFAPQPILRAKFTQILTSLAPVLLQQDAEALLLRSSIGCL
ESLLLAQDASAWELGVTQIGPRRAVAGLLNLALEQRPKIRKRAQEALRNVLKNPPPSPSL
DHPAADMCAHTALANLEDIAGKAAAAKKQKGAESAHDPALIHALQLIKTIASASGGWPSK
KIEALCDLLLGISRSGNEYMTMATFEIFEMIFEGMADDVASSKLPRLMEIISELRPAAND
TQLIPPWLAILSRGYDVSAQLDPDEVFQNLPEIFSMVAQYLESSAHNIRISASECLVSFM
ANCVPQPVILEPSVYDEKTLDKIAKIAESLLSLKYQQAWMESFNVFGAMFDSLRWRANPM
MLNITKAVGELRGSDSFQGKKEADEVIGKAIRAMGPEAVLSILPLNIAKPAKGQQGRAWM
FPILRDYLSNTNLAHFRQEMVPLSELMFQKVLDHGKAEKTLEVKIFETLVQQIWATLPGY
CDLPLDVTDAFDQSFAELLANILYKQVELRLEVCRALKILIESNQAIATIEDDDEEDLVL
QSRISRATARKNLEHLGSFAGNMLAVLFNVYTQTLPQSRGPILLTINAFLSVTPKQELID
TFDRVSKMLAAELQQTADQEKPKQQPKQNAMPSTSNTLMDLIICIALYLPRESYTALFEI
ANVIIFRDNEPQLQKKAYKLVPRLTESETGKQALAARNDELQQMFLSSAEKVSAPARRER
LAALSALLPFIPDTSLHFIPSILSEVVICCKENNERAREAAYDLLVQIGHRMESANDAPI
DNSKIPHMPADAPAGKANVEEFLTMVSAGLVGSTPHMISASITALSRVLYEFRRSVSTQT
LADLVQTMDLFLTSNNREIVKSVLGFVKICVVSLPSELVIPRLSSMVPNLIIWSHEHKGH
FKSKVRHILERMIRKFGFDLVNQNCPESDRKLIVNIRKTKDRAKKKKDAAKAAGEESDEE
DGRQGRKFDNELDQALYSSDSDDSDDGSDDDESGAAAAGAKGKRGNRKGGNTYIVEDEDE
PLDLLDRNALANISSTKPVKMRKPGRTKAKTDLDGKLILGKDDDEAMEVDGVENDGSGVN
AYVAALKGKDAGKRGLRGKLKFSNKRGQDDEEMEDMDEGDAAAVKAQVDKSRGGGRPPFR
GGRGGQDRGGRGGRGGRGGGGDRGGRGGKGGIAAGRKGLGEDRRRSGGPSGGGVNKGRGG
RGRR
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccaactcttgccgagaagctggacaagatccgctccccgggtcttcaaagt
caaaagaggactgccgtagtccttgaggcggtcgacacaacactgaaggagcaaaacgct
cagcccacaccgactggctacttcgctgcccttctcggcctcctcacccaagctgtagag
agcggcaacatcagctccgacacgacgacctccgtggtttacctcctcgatatcgtcacc
ccgtttgcgcctcaacctatccttcgcgccaagttcacccagatcctcacctcgctcgca
cccgttctcctgcaacaagatgccgaagccctcctccttcgctcgtctatcggatgcctc
gaatctcttcttctcgcacaagatgcgagtgcttgggagctgggcgtgacccagatcggc
ccccgcagagccgtcgccggtctgctcaacctcgctcttgagcagcgcccgaaaatccgc
aagagggctcaggaagcgctccgaaacgtcctcaagaacccgccccctagcccctcactc
gaccacccggctgcggatatgtgtgctcacaccgctctcgctaacctcgaggatattgcc
ggaaaggccgcggcggcaaaaaagcagaaaggagccgagtctgcccacgatcccgctctg
atccacgctctccagctcatcaagaccattgcctctgcaagtggtggttggcccagcaag
aagatcgaggctctgtgcgacctcctcctcggaatctcaagatccggcaacgagtacatg
acgatggcgacttttgagatttttgaaatgattttcgagggtatggccgacgacgtcgct
tcgtccaagctcccacgactgatggaaatcatttcggagctgcgccctgccgcaaacgac
acgcaacttattccgccatggctggcaatcctctcgaggggttacgatgtctctgcacaa
ctcgaccccgatgaagttttccagaacctgcccgaaatattctcaatggtcgcccagtac
ctcgagtcctccgcacacaacatccggatttccgcttccgagtgcttagtctcatttatg
gcgaactgtgttccgcagccggtcattctggagccatcagtttatgacgagaagactttg
gacaagattgccaagattgcagagtctctactcagcctgaagtaccaacaagcctggatg
gagagtttcaacgtctttggagccatgtttgactccttgagatggcgggcaaaccccatg
atgctcaacatcaccaaggctgttggagaactccgtggcagtgactctttccaaggcaag
aaggaggccgacgaagtcattggcaaggccatccgcgccatgggccccgaggctgttctg
tccatcttgcccctgaacatcgcgaagcccgccaagggtcaacagggccgcgcctggatg
ttccccatcctgcgtgactacctcagcaacaccaacctcgcgcacttccgtcaagagatg
gtcccacttagtgagctcatgttccaaaaggtgcttgatcacggcaaggccgagaagact
ttggaagtcaagatcttcgagacccttgtacagcaaatttgggccaccttgcccggttac
tgcgatctcccgctcgacgttaccgacgctttcgatcagtcattcgccgagctcctggca
aacatcctgtacaagcaggtcgagttgcgtctggaggtctgccgtgcgctcaagattctc
atcgaatccaaccaggctattgcgaccatcgaggatgacgacgaggaagatctcgttctt
caaagccgcatctccagagctacggcgaggaagaacctcgagcacttgggtagctttgcc
ggaaacatgctcgccgttctcttcaacgtctacacccagacccttcctcagtcaagagga
cctatcctcctcaccatcaatgctttcctcagcgtcacccccaagcaggagctcatcgat
acctttgaccgggtcagcaagatgctcgcagcggaactgcagcagactgccgaccaggag
aagcccaaacaacaacccaagcagaatgctatgccctcaactagcaacaccttgatggat
ttgatcatttgcatcgcactctacctgcctcgcgaaagctacacggctttgttcgaaatt
gccaatgtcatcatcttcagggataacgagcctcagttgcagaagaaggcttacaagctg
gttccccgccttaccgagtcagaaaccggcaagcaggccctcgcagcacgcaatgacgag
ctgcagcagatgttcctgtccagcgccgaaaaggtttccgcccccgctcgcagagaacgc
cttgccgctctctctgccctgctgcctttcatccccgatacctcactccacttcattcct
tccatccttagcgaagtcgtcatttgctgcaaggagaacaacgagcgcgccagagaggct
gcatacgacctccttgtgcagatcggtcaccgcatggagtctgccaacgacgcccctatc
gataacagcaagattcctcatatgcccgcagacgcgcccgccggtaaagccaacgttgaa
gagttcctcaccatggtcagtgccggtctcgtcggcagcacccctcacatgatctcagcg
tccatcaccgccctcagccgcgtgctgtacgagttcagaagatccgtcagcacccagacc
ctggccgacctcgtgcagaccatggacctattcctgacctccaacaaccgcgagatcgtc
aagagcgtcctgggcttcgtcaagatctgcgtcgtcagtcttccctcggagctcgtcatc
ccccgcctgtcctccatggtccccaacctcatcatctggagccacgagcacaagggccac
ttcaagagcaaggtcaggcacattctggagcgcatgatccgcaagtttggcttcgacctc
gtcaaccagaactgcccagagagcgacaggaagctcattgtcaacatccgcaagaccaag
gaccgcgccaagaagaagaaggacgcggccaaggccgccggcgaggaaagcgacgaagag
gacggccgccagggacgcaagttcgacaacgagctcgaccaggccctctatagcagcgac
tcggacgattccgacgacgggtccgacgacgacgaaagcggtgctgcggctgctggcgcc
aagggcaagcgcggcaacagaaagggcggcaatacctacattgtcgaagacgaggacgag
ccgctcgatctgctcgaccgcaatgccctggccaacatctcgtccaccaagcccgtcaag
atgcgcaagccgggccggaccaaggccaagactgacctggacggcaagctcattctcggc
aaggacgacgacgaggcgatggaagtcgacggcgttgagaacgacggctcgggcgtcaac
gcctacgttgccgcgctcaagggcaaagacgccggcaagagaggtctccgcggtaagctc
aagttcagcaacaagcgcggtcaggacgatgaggagatggaggacatggacgagggcgac
gccgccgccgtcaaggctcaggttgacaagagccgtggtggtggtagaccgcccttccgt
ggcggacgaggtggccaggaccgcggtggacgcggaggacgtggtggacgcggcggtggt
ggtgatcgtggcggtcgcggtggcaagggtggtattgctgccggccgcaagggactcggc
gaggataggagacggtcaggtggcccgtcgggcggaggtgtcaacaaggggagaggcggc
cgtggacggagatga
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