Colletotrichum lupini: CLUP02_01492
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Entry
CLUP02_01492 CDS
T08561
Name
(RefSeq) metallo-beta-lactamase superfamily protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
clup
Colletotrichum lupini
Pathway
clup03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CLUP02_01492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_01492
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_01492
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CLUP02_01492
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CLUP02_01492
U7-dependent histone pre-mRNA processing factors
CLUP02_01492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
DUF6154
Lactamase_B_2
DUF4106
Motif
Other DBs
NCBI-GeneID:
73335542
NCBI-ProteinID:
XP_049136489
UniProt:
A0A9Q8W9Z9
LinkDB
All DBs
Position
1:complement(join(4980967..4981454,4981554..4982262,4982342..4983473,4983529..4983752,4983811..4983891,4983952..4984104))
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AA seq
928 aa
AA seq
DB search
MASKRKASAMAATVSEEPVDPADELMFLCLGGGNEVGRSCHIIQYKGKTVMLDAGQHPAY
DGLAALPFFDDFDLSTVDGKAVNELGNQYLGSYLWLRNSECLSATLAPDGAHCYAFYAIS
FLYTETIQRPHSSHLPCLVVLAIVIALGVVALDFHVDHAASLPYVLSKTNFRGRVFMTHP
TKAIYKWLIQDSVRVGNTSSNPTSQPVYTEADHLNTFPQIEAIDYHTTHTISSIRITPYP
AGHVLGAAMFLIEIAGLKIFFTGDYSREQDRHLVSAEVPKGVKIDVLITESTYGIASHVP
RLEREQALMKSITSILNRGGRVLMPVFALGRAQELLLILDEYWGKHADFQRFPIYYASNL
ARKCMVVYQTYVGAMNDNIKRLFRERMAEAEASGDGSGKGGPWDFKYIRSLKNLDRFDDV
GGCVMLASPGMLQNGVSRELLERWAPNDKNGVIITGYSVEGTMAKQIMQEPDQIQAVMSR
TTAGARRGPGGESEKVFIPRRCSVAEYSFAAHVDGTENREFIEEVAAPVVILVHGEQHNM
MRLKSKLLSLNASKTAKVKVFSPKNCEELRIPFKQDKTAKVVGKLATIPPPTSLSDPTSL
PQQLVTGVLVQNDFKLSLMAPEDLREYAGLNTTTITCKQRLRLTAAGVDLVRWGLEGVFG
SVEELPEMRKGHPAHDKAVDGAAVANGNGAEKSEGDDVDQEMGEEAADEEVARLVAAYLV
MGCVAVRYRSDGEVELEWEGNMLNDGIADAVMACLFSIESSPAAVKRSAASHSHDHDHAP
KPLPKNPHANVPATERLERFLMFLEAQFGADNVNPVAEPRLPPQPEDGAAAVTTKAIKSD
DASDASMDVSEDDAEAEQEKKLEARRRAEIERLIKLGIPVPGIRIKVDKMEAVVWLEDLE
VECSHKAFADRVRRVCEHAAEVTAPLWG
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaagagaaaggcttcggccatggccgccaccgtttctgaggaaccggtcgac
cctgccgacgagctgatgtttctctgccttggaggtggcaacgaagtcggcaggtcatgt
cacattatccaatacaagggcaagacagtgatgcttgatgctggccagcacccagcatac
gatggccttgcagcgctgcctttcttcgacgacttcgatctaagtacggttgatggcaag
gcggtgaacgaacttggaaaccaatatctgggatcatacctctggctcaggaatagcgag
tgcctttcggcgactctcgcacctgatggagcccattgctacgccttttatgctatttca
ttcttgtacacagaaacaatacaaagacctcattcttcccacctgccttgccttgtcgtc
ctcgccattgtgatagctcttggcgttgtcgccctagatttccacgtagatcatgcggct
tcattaccatacgtcttatctaagactaacttcagaggccgagtctttatgacccatcca
acaaaggccatctataagtggctcattcaagacagtgtccgtgttggaaatacctcgtcc
aacccgacgtcacagccagtctacacggaagcagaccatctgaacactttccctcaaatc
gaggccattgattaccacaccacacacaccatttcgtccatccgcattacgccctatcct
gctggccatgtcctcggagctgccatgttcctcatcgagattgcgggtctcaaaatcttc
tttaccggagactactcacgagagcaagatagacatttggtctcggcagaagttcccaag
ggcgtcaagatcgatgtcctgatcacggagtcgacctatggcattgcctcccacgtaccc
cgcctggagcgcgagcaggccttgatgaagtccattaccagcatccttaatcgcggaggc
agggtcctgatgccagtctttgccctcggcagagcccaggagcttctgctcatcctggat
gagtactggggcaagcatgcagacttccagcggttcccaatctactacgccagcaatctc
gccagaaagtgtatggttgtttatcagacctacgtcggcgccatgaacgacaacatcaag
cgcctcttccgcgagcgcatggccgaggccgaagcatccggtgacggatccggcaagggc
gggccctgggacttcaagtacatccgctccctcaaaaacctcgaccgcttcgacgacgtc
ggaggctgtgtcatgctggccagtcctggtatgcttcagaatggtgtgagtagagaactt
ctcgagaggtgggcccccaacgacaagaacggcgttatcatcaccggttacagtgtcgag
ggcaccatggccaagcaaatcatgcaggagcccgaccagatccaggccgtcatgagccgg
acgacagctggtgcccgacgcggccccggcggggagagcgaaaaggtcttcatcccccgt
cggtgcagcgttgccgagtactcctttgcagctcatgttgatggcacggagaaccgtgag
ttcatcgaggaagtcgcagccccagtggtaattctcgtccacggcgagcagcataacatg
atgcgcctcaaatccaagctcctctccctcaacgcaagcaagacggcaaaagttaaggtc
tttagtcccaaaaactgcgaagagcttcgcatccccttcaagcaggacaagacggccaaa
gttgtcggcaagctcgccaccatccctcccccgacatccctctccgatcccacctccctg
ccgcaacagctcgtcaccggcgtcctcgtccaaaacgactttaagctctccctcatggcg
cccgaggacctgcgcgagtacgccggcctcaacaccactacaatcacctgtaagcagcgc
ctccgccttacggctgccggcgttgaccttgtacgctggggtctcgaaggcgtctttggc
agcgtcgaggagctccccgagatgcgcaagggtcacccggctcacgacaaggccgttgac
ggtgctgcagtcgccaacggaaacggcgccgagaaaagcgaaggcgatgatgttgaccag
gagatgggcgaggaggcggccgacgaggaagtcgcccgcctcgtggccgcgtacctggtc
atgggctgcgtcgccgtgcggtaccgcagcgacggagaggtcgagctcgagtgggagggc
aacatgctgaacgacggtattgctgacgccgtcatggcgtgtctgttctccatcgagagc
agtcccgcagcagtaaaacgctccgcggcttcccacagccacgaccacgaccacgccccc
aaacccctccccaaaaacccccacgcaaacgtcccagcgacagaacgcctcgagcgcttc
ctcatgttcctcgaagcccagttcggcgccgacaacgtcaacccagtcgccgaaccccgt
ctcccgccgcagcccgaggacggagcagcagcggtgacaacaaaggcaatcaagtccgac
gacgccagcgacgcgtccatggacgtgtccgaggacgacgcggaggcggagcaggagaag
aagctggaggcgcggcgccgcgcagagattgagcgcctcataaagctcggcatccccgtg
ccgggcattcgtatcaaggtcgacaagatggaggctgtcgtctggttggaggatctggag
gtggagtgcagtcacaaggcttttgccgaccgtgtgagacgtgtctgcgagcacgctgcc
gaggtcacggccccgctttggggttaa
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