Colletotrichum lupini: CLUP02_01900
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Entry
CLUP02_01900 CDS
T08561
Name
(RefSeq) ubiquitin elongating factor core
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
clup
Colletotrichum lupini
Pathway
clup04120
Ubiquitin mediated proteolysis
clup04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CLUP02_01900
04120 Ubiquitin mediated proteolysis
CLUP02_01900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clup04121
]
CLUP02_01900
Enzymes [BR:
clup01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CLUP02_01900
Ubiquitin system [BR:
clup04121
]
Ubiquitin ligases (E3)
U-box type E3
CLUP02_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
73335946
NCBI-ProteinID:
XP_049136893
UniProt:
A0A9Q8WA52
LinkDB
All DBs
Position
1:complement(join(6598514..6599408,6599470..6600872,6600958..6601162,6601211..6601881,6602200..6602259))
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AA seq
1077 aa
AA seq
DB search
MDPNEGNQAPDAPDVKKMNDIRLRRLAKLGSSTRSPKPEGESSADAETSNSATSEVKAPK
APASPTPSFTPKPATSNPFNQLGVKSGSGTSSPAGSNNTENHKRIASDRAAAPAPAKKAN
VEESLDDFSDRILSHIFRITVDPERVVDTHGHKLTFLPEASQELQENGSPLKLTTSILDS
ALLEAVTAIPADKPLLGYLLPSFKRIIRTNILKETAEKREALEEAKRLCVSNALFSLTIP
DLFGRSRPESLVTYLLKGHEQDDGVCLDFLREAVKRFPEDEQFPAAFATAMHTLSIKLST
LSMEDDYKPYISALMSYTKFPPLLNALAQHPNFMTAHKLGSHVEKETILGPFFRISPLQT
EVTMTYFPNPRALNRTQAAPSQDALRAILRVHQDELFTIANAFIRADTDTRSRVLDWFAS
AINGNHKRRALQVDPKEVSSDGFMMNLTVVLDRFCSPFMDTTFSKVDRIEVEYFRRNPRV
DIKEETKLNADQSTSDAFYGTQSQGSSNFISEVFFLTLAAHHYGSEATNSKLKGLERDIK
WYEKHLAAMEAERIKVQNQPQQLAMFELTLKRHTTVLEKAIAMKYAIEGIFLDEKMQELS
LRFMRYVAVWLLRLASQSSYTPDKDLQLPLPAQAPEAFACLPEYALQDVVDNFKFVYRYL
PQIMPSAVGSEMIALCIAFLRSSEYIKNPYLKSSLVTLLFSGTWPFSHFKKGVLGDQLYG
SKFANDNLLHALMKFYIEAESTGVNTQFYDKFNIRYEIFQVIKCVWGNDVYKQQLTRESK
VNRQFFVQFVNLLLNDATYVLDEALTKFPKIHTLQQELEFGNTLSTQDREKKQEELTALE
GQAGSYMQLANETLAMMKLFTSALTLAFTMPEIVQRLASMLNYNLETLAGPKMGQLKVNN
PTKYHFQPRVLLSDFIDIYLNLGSSQAFIDAVASDGRSYKPEVFDKARFILSKRSMKEAV
ELEQLDTLMAKFLESKQIADQAELDLGDIPAEFEDPIMGDLMKDPVILPSKHIVDRGTIV
QHLLSDPKDPFTRQPMTVDDAIPHTELKEKIQKWREEKIAAAKARATGGDAMDTTEG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaacgagggcaaccaagcgcccgatgcgcccgacgtcaagaagatgaacgat
atccgacttcgacggctcgccaagcttggctcctcgacaagatcccccaagccggaagga
gaatcgtcagcagacgccgagacatcaaactccgcaacgagcgaagtcaaggctcccaag
gccccggccagcccaacaccctcatttacaccgaagcctgccacctcgaaccccttcaac
cagcttggtgtcaagtccggtagtggtacatcttcgccagctggatcgaacaacaccgag
aaccacaagcgaattgcttccgaccgcgcagctgcacctgctcccgcaaaaaaggcaaat
gtggaggagtcattggatgatttttcagatcgaatcctcagccatattttccggatcaca
gtcgacccagagagagttgtcgatacccacggacacaagcttaccttcctgccggaagct
agccaagagctccaagagaacggatcgccgcttaaattgacaacctccatcctcgatagt
gccttgcttgaggccgtcactgcgattcccgccgacaagccccttctcggctacctactt
ccctcattcaaacgcatcatccgtacaaacatactcaaagagacggcagagaagagggag
gctctggaggaggcaaagagactgtgtgttagcaacgctttgttttcgctcacaatcccg
gatctctttggacgatcacgccctgagagtttggtcacctacctgctcaaaggacatgag
caggacgatggagtctgcttggacttcttgcgggaggcagtaaagcgctttcccgaggat
gagcaattcccagctgcttttgccacagccatgcacacactcagcattaagttgtcgact
ttgtccatggaagatgactacaagccgtatatcagcgccttgatgtcctacacaaagttc
cctcctctgctaaatgcactggcacaacatcccaacttcatgaccgctcacaagctggga
tcccatgttgaaaaggagacgatcctgggacccttcttccgcatctctcccttgcaaacc
gaggtgacaatgacatacttcccgaacccacgggccctgaatcgcacccaggctgcccca
tcccaagatgctctgcgggctattcttcgagtccatcaggatgagctcttcacgatcgct
aatgcctttatccgagctgacactgacacccggagtcgggtactcgattggttcgcctcc
gctatcaacggcaatcacaagcgtagagctctccaggttgaccccaaagaggtgtcctca
gatggcttcatgatgaacctcactgtcgtattggaccgattctgctctcccttcatggac
acaacgttctcaaaggtcgacaggatcgaagtggagtatttccgccgcaacccccgtgtg
gacatcaaggaagagaccaagctcaatgccgaccaatcgacgtcagatgcattctacggc
actcaatctcagggcagctcaaacttcatttcagaggtttttttcttgactttggctgcg
caccactacggcagtgaggcaacaaactcgaagctcaagggtctcgaaagggatatcaag
tggtacgaaaagcatttggctgccatggaagctgagcggattaaagtccagaaccagcct
cagcagcttgcaatgtttgagttgacactcaagcgccacactacggtcttggagaaggca
atcgcaatgaagtacgcgatcgagggtatcttccttgacgagaagatgcaagaactgtcg
cttcgcttcatgcgatacgtggccgtgtggcttcttcgccttgctagccagtccagctac
acccccgacaaggatcttcaacttccccttcctgctcaggcccctgaggcttttgcgtgc
ctgccagagtatgcgctccaggacgtggttgacaacttcaagtttgtgtaccgctacctt
cctcaaatcatgccgtctgctgttggcagcgagatgattgcgctctgcatcgccttcttg
cgttcgtcagagtacatcaagaacccgtacctcaagtcgtccttggtcacattgctcttc
tccggcacctggccattctcgcactttaagaagggtgtcttgggagatcagctctacgga
tccaagtttgcaaacgataacctgttgcatgccctcatgaaattctacatcgaagcggag
tcgactggtgttaacacccagttctacgacaagttcaacatcagatacgagatcttccag
gttatcaagtgcgtttggggcaatgatgtgtacaagcagcagttgacgagagagagcaag
gttaacagacaattctttgttcaattcgtcaacttgctgctcaatgacgcgacctatgtg
cttgacgaggcactgacaaagttccccaagatccatacgttacaacaggagttggagttt
ggcaacacgctatccacgcaagatagagagaagaagcaagaggagttgacagcattggag
ggccaggcgggctcatacatgcaattggccaatgagacgctggcgatgatgaagctcttt
acatctgcattgacattagcatttacaatgcctgaaattgtccagcgtctggcaagcatg
cttaactacaacctggagactcttgcgggacccaagatgggtcagctcaaggtaaacaat
ccaaccaaatatcacttccagccaagggttctgctgtcagacttcatcgacatctacctc
aacttgggctcatcgcaagcgttcatcgacgctgttgcctcggatggtcgctcgtataag
cccgaggtctttgacaaggctagattcatcctctcaaagcgcagtatgaaggaggccgtt
gaactcgagcagctcgacacgttgatggccaagttcctcgagtcgaagcagattgcggac
caggccgagctggaccttggagacatcccggccgaattcgaagacccgattatgggagat
ttgatgaaggatcccgttatcctgccatcgaagcatattgttgatcggggaactattgtg
cagcacttgctgtcggatcccaaggatccctttacgcgacagccgatgacggtggatgat
gccatcccgcacactgagctgaaggagaagattcagaagtggagggaggagaagattgcg
gcggccaaggccagggcaacgggcggcgatgcgatggacacaacggaaggctga
DBGET
integrated database retrieval system
