Colletotrichum lupini: CLUP02_01901
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Entry
CLUP02_01901 CDS
T08561
Name
(RefSeq) TRAF-type zinc finger
Organism
clup
Colletotrichum lupini
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Gene cluster
GFIT
Motif
Pfam:
zf-TRAF
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-TRAF_2
zf-RING_UBOX
Sina_ZnF
zf-C3HC4_4
Prok-RING_4
zf-rbx1
U-box
zf_UBZ
FapA
DivIC
zf-P11
Motif
Other DBs
NCBI-GeneID:
73335947
NCBI-ProteinID:
XP_049136894
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Position
1:complement(join(6603587..6604851,6604916..6605024))
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AA seq
457 aa
AA seq
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MSHQGFPNEDAAITHLVHNLVENAVRSVEEVPIPLTPRTPTQWPVEELATREALRYSISP
SHVKDLLDFSALNYVEEPDDNLLCPICKLPVITPIITPCDHTFCLECLKRHVHSSDTCPI
DRTRFRARDCKTSRLLTNILDSLVVECPNTERGCGEKMKRDEVVKHTISCPYTLHDCPEK
TCDKRVEQWLAVSGKCWHFEQTCEYCEEKMEAASMADHISKVCLKNTTDCTECGETIKLS
ELGQHRDEHCPETSVPCTYHDFGCKHEALRKTLATHQDECIFRVVAVVGEKVKSQETQIE
KLQKQTEDQERQIMAMKDERRDCISWDDVLNLNNVQGGPKFKPTEAVMTIYEDMERRMEE
LKKEFTDLEGRQTVMVLNQVMPIKDQITEIRSNLGILKMHMAWLMNKSREEVERSRLANR
SVGSTSRTRGSSDSDGEATTPSTSRRLSDGSNGIPRL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatcaaggctttcccaacgaagatgcggccatcacccatctcgtacacaacctt
gtcgagaatgctgtgcgctctgtcgaggaagttccaatccctttgacgccacgaactcct
acccagtggcccgttgaagaacttgcgacccgggaggccctgcgatactccattagccct
agtcacgtcaaggatctcctcgacttctccgccctcaactacgtcgaagaacccgacgat
aacctactctgcccaatctgcaagctgcccgtcatcaccccgatcattacgccctgcgac
cataccttctgtctggaatgtctgaagcgccatgttcactcatccgatacctgtcccatc
gacaggacgagattccgagccagggactgcaagacgtcgaggcttttgacgaatatcctc
gatagcctggtagtcgaatgccccaatactgagcgagggtgtggcgaaaagatgaagcgc
gacgaggtcgtcaagcacacaatcagttgcccatacacgctgcacgactgccccgagaaa
acatgtgataagagggtggagcaatggttggctgtgtccggcaagtgctggcactttgag
cagacgtgcgaatactgcgaggagaagatggaagcggcgtcgatggccgaccacatcagc
aaagtgtgcctgaaaaacacgacggactgtaccgaatgtggagagaccatcaagctctcc
gagttgggacaacatcgcgacgaacattgcccagaaacctcggtcccttgcacatatcat
gactttggttgcaagcacgaggcacttcgcaagacactagcgactcatcaagacgagtgt
attttcagggtggttgctgtcgttggagaaaaggtcaaatcacaagagacacaaatcgaa
aaactgcaaaagcagacggaagatcaggagcgacaaatcatggcaatgaaggacgagcgg
cgagactgcatctcctgggacgacgtattaaatctcaacaacgtccaaggcggaccaaag
ttcaaacccaccgaggctgtcatgactatttacgaagatatggaacgtcgcatggaggag
ctcaagaaagagtttacagacctcgagggccgtcagacagtgatggtcctgaaccaggtc
atgccgattaaggatcagatcaccgagatcaggagcaacttgggcattctcaagatgcac
atggcatggctcatgaacaagagccgagaggaagtcgagcgcagccggttggccaaccgt
agcgttggtagcaccagccgaacgaggggcagctctgacagcgatggcgaggccactact
ccgagtacatctcggcggctgagtgatgggtcaaatggcatcccccgcctttga
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