Colletotrichum lupini: CLUP02_02387
Help
Entry
CLUP02_02387 CDS
T08561
Name
(RefSeq) WD domain-containing protein
KO
K14848
ribosome assembly protein RRB1
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clup03009
]
CLUP02_02387
Ribosome biogenesis [BR:
clup03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CLUP02_02387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
MIOS_WD40
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
73336429
NCBI-ProteinID:
XP_049138562
UniProt:
A0A9Q8SGF0
LinkDB
All DBs
Position
2:complement(join(69965..70322,70392..70557,70622..70665,70729..70834,70920..70963,71093..72332,72381..72585))
Genome browser
AA seq
720 aa
AA seq
DB search
MSKRSADVEMGDAPLKGGDRPEGMEIDEKAPDMGEFEDEFEDEFEEDEIMEAGVDGRPDA
EREAEEREAAVDQGTFIVGRNKLEAGQTLAPDVSTYEMLHNLSTPWPCLSFDILRDSLGD
NRKVYPATMYTVAGTQAENARAGENQLMVMKFSGLSRTEKDDEESDDDDEDGDEDAEPIL
EHKAIPLNSTTNRIRAHQIPSQDASRPPTTLTATMTESSNVFIHDITPHIYSFDNPGTVI
SAQQNKPVSTIRAHKAEGYALDWSPLVPSGKLLTGDNDGLIYVTTRTDGGGFVTDTRPFQ
GHTSSVEEIQWSPSEQSVFSSASSDGTIRVWDVRSKSRKPALSMHVSNHDVNVMSWSPLT
THLLASGADDGEFAVWDLRQWKQSSTSAADKPSPIASFNYHKEQVTSIEWHPTDDSIIAV
AAGDNTVTLWDLAVELDDEESKDTGGVKDVPPQLLFVHYLSNVKELHWHPQITGSLMATG
DETLHGLGAHTDEEPIGMTRLSQGSSISGIILDSGYEIEGLFGDPHSTIEKRVKGARPSV
SGINKDDHFVLFNMRYLASLALLCHLAHGAPSTPAEHSARTAAVFEVDRFFAGSLPPSTR
NFVIFSVQPTPGADFANCTINTDTGPKVPTVDKVVCTDVNSITWSLEPMGTGMHFSVWWA
FTSHASLLGGIHLDESYFKDTTLADGSKSQSYVGPHKFTLETTMVMNNPGGKRKMEESVE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgctctgctgatgtcgaaatgggggatgcccccctcaagggaggtgatcgc
cctgagggtatggagattgacgagaaggcccccgacatgggcgagttcgaggacgaattc
gaggatgagttcgaggaggacgaaattatggaggccggtgttgacggacgccctgacgca
gagagggaggctgaggagagggaagctgccgtcgaccagggcactttcatcgtcggacga
aacaagcttgaggcgggacagacactcgcgcccgatgtttctacctacgagatgctgcac
aacctgagcacgccatggccctgtctgtctttcgatattctccgcgacagtcttggtgac
aaccgtaaggtctatcccgccaccatgtacaccgtggctggtacacaagcagagaacgcc
agggctggcgagaaccagctgatggttatgaagttcagcggtctgagccgtacggagaag
gacgacgaggaatctgatgacgacgacgaagatggcgatgaggacgccgagcccatcctt
gagcacaaggcgatccccttgaactcgactacgaaccgaatccgcgcccatcagatcccc
tcgcaagatgcttccagacctcctacgaccctcacagccaccatgaccgagtcatccaac
gtcttcattcacgatattacgcctcacatctactccttcgataacccgggcaccgtcatc
tccgcgcagcagaacaagccagtgtcgactattcgcgcccacaaagcagagggttatgct
cttgactggtccccccttgttcccagtggaaagctcctcaccggtgacaacgatggtctc
atttacgtcacaacccgcaccgacggcggcgggttcgtcaccgacacccggccattccag
ggtcacaccagcagcgttgaggaaattcaatggagtccctcggaacagtctgtcttctca
tccgcctcaagcgacggcacaatacgcgtttgggatgtccgtagcaagagcagaaagccc
gcgctttcaatgcatgtcagcaaccacgatgtaaacgtcatgtcgtggtcacccctcacg
acgcatctgcttgcgtctggcgccgacgacggcgaattcgccgtctgggatctgcgccag
tggaagcagagctctacctctgctgccgacaagccctcgccgattgccagcttcaactac
cacaaggagcaggtcacgagcatcgagtggcaccccacagacgatagtatcattgctgtt
gcggcgggcgacaacaccgttactctgtgggatttggctgtcgagctggacgacgaggag
agcaaggataccggcggtgtcaaggacgtgccgcctcagcttctgttcgtccactacttg
tccaacgtcaaggagctccactggcatccccagatcactggcagcttgatggctactggt
gatgaaactctgcatggcttgggcgctcacacagatgaggagcccattggtatgacccgt
ttgtcacaaggaagttctatttcaggtatcatattggattctgggtacgagattgagggc
ctttttggcgaccctcattcgaccattgaaaagcgagttaagggagcgaggccgagtgtc
tccggcataaataaagacgatcatttcgttctcttcaacatgcggtatcttgcaagtctg
gctcttctctgccatttggcacatggtgccccttctactccggctgaacactccgcacgt
actgcagcagtcttcgaggtggacaggttcttcgcgggaagtcttccaccaagcacaaga
aactttgtcatattctccgtccagcccacccctggcgccgactttgctaactgtaccatc
aacacggacactggtcctaaagtaccaacggtcgacaaggtggtctgcactgacgttaac
tctatcacatggagtctggagccgatggggacagggatgcatttcagtgtctggtgggct
tttactagtcatgcttcgttgctgggcggaatacacctcgacgagtcgtacttcaaggac
acaacactcgcagatgggagcaagtcacaaagctatgtggggccgcacaagttcaccttg
gagactaccatggtgatgaacaatcccgggggcaagagaaagatggaagagagcgtggag
tag
DBGET
integrated database retrieval system
