Colletotrichum lupini: CLUP02_02788
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Entry
CLUP02_02788 CDS
T08561
Name
(RefSeq) elongation factor Tu GTP binding domain-containing protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
clup
Colletotrichum lupini
Pathway
clup03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CLUP02_02788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clup03009
]
CLUP02_02788
Ribosome biogenesis [BR:
clup03009
]
Eukaryotic type
Pre-60S particles
GTPases
CLUP02_02788
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
AAA_lid_At3g28540
Motif
Other DBs
NCBI-GeneID:
73336826
NCBI-ProteinID:
XP_049138959
UniProt:
A0A9Q8SI06
LinkDB
All DBs
Position
2:join(1391969..1392031,1392091..1395279)
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AA seq
1083 aa
AA seq
DB search
MPVVTPDKLASLQRHAVDVRNICILAHVDHGKTSLTDALLATNGIISPKLAGKIRYLDSR
PDEQLRGITMESSAISLYFSMLRRSAPDAEPEAKEYLINLIDSPGHIDFSSEVSTASRLC
DGAVVLVDAVEGVCSQTVTVLRQTWTEKLKPLLVINKIDRLITELKMTPAEAYTHLSKIL
EQVNAVLGSFFQGERMEEDLNWRERMEERVQAAAAKEAGLDSMTESGELQFEERDDEDLY
FAPEKNNVIFSSAIDGWAFTVRQFAGLYQKKLGIKRDVMEKVLWGSFYLDPKTKKILGQK
HLKGRNLKPMFVQLVLEPIWTVYQATVGGDNNRGDPALLEKITKSLGLTIPPHIMRSRDP
RLLLTTVFASWLPLSTAMLVSVIESLPSPPVAQAERLPEMLEDVPGSDAINEEIKNAMIS
FKTGPSDPVVAYVSKMVSVPESELPHNKRKPGQLTADEARELARKKRAEAARAQAAAPTS
GNEINDLTTALEEVNLDGYAPEHEEKEVDPEHLIGFARMYSGTLSVGDSLWVIPPKWSPA
NPNAQPSPKQVTVTALYMLMGRNLESLDSVPAGVVFGIGGLEGHLLKNGTLCSRLDGAVN
LAGVAGTLGKPIVRVALEPVNPADLDKMIHGLRLLVQSDPCAEYEQFSSGEHVLLTAGEL
HLERCLTDLKERFARCDIQAGAPIVPYRETIVRAEEMRPPANKDLGRGVVVGTTSSKQVS
IRLQVRPLPSDATDFLLKNGDVIKRMYSDRTPATNNTTAEETQGTEGTGATAPGEEKIDV
DTDLTAAKTMSLDDFKTGLQSALESSRGGREHFKSAIDRIAAFGPRRTGPNILIDATKEG
LLAKLFSQTASSERDGSAAPQADEALHPAHVADKIPYAFQLATAQGPLCHEPVRGIAVFL
EDVVINPTEDESSARDRLPRLTGEIIKTFTSSLRSGMLDWSPRLMLAMYTVEIQASTEVL
GRVYDVLTRRRGRVLSEAMKEGTPFFSINSVLPVAESFGFADEMRKRTSGAAQPQLIFAG
YEVLDQDPFWVPFTEDDLEDLGELADKENVAKRYMDGVRRKKGLLVEGRNVARDAEKQKT
LKR
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgtaactcccgacaagctggctagcctgcaaaggcatgccgtggatgtgcgc
aacatctgcatcctggcccacgttgatcatggcaaaacatcactgacagacgcccttttg
gcaacaaacggcatcatctcacccaaactcgccggcaagatccggtacctcgactctaga
cctgatgagcagctccgaggcatcaccatggaatcctccgccatctccctctacttctcc
atgctgaggagatccgcacccgacgccgagcccgaagccaaggagtacctcatcaacctc
atcgactcgcccggccacattgactttagcagtgaggtctccaccgcctcacgcctgtgc
gacggcgccgtcgtgctcgtcgacgccgtcgagggcgtgtgcagtcagaccgtgaccgtc
ctgcgccagacatggaccgagaagctcaaacccttgctcgtcatcaacaagattgaccga
ctcattaccgagctcaagatgacgcctgccgaggcctacactcatctcagcaagattctc
gagcaggtcaacgccgtgctgggaagtttcttccagggcgaacgcatggaggaggatctc
aactggcgcgagcggatggaggagcgcgtccaggcggcggctgccaaggaggctggcctg
gattctatgaccgagtctggagagctccagtttgaggagcgcgatgacgaggatctctac
tttgcaccggagaagaacaacgtcatcttcagtagcgccattgacggttgggcgtttacc
gtgcgccaatttgccggcttatatcaaaagaagctcggcatcaagagagatgtcatggaa
aaggtgctatggggcagcttctacctcgaccccaagaccaagaagattctgggccagaag
catctcaaggggagaaacctaaagcccatgtttgtgcagctggtgctggagcctatctgg
acagtctaccaagccaccgtcggcggcgacaacaacaggggcgatcccgcgttgctggag
aagattacaaagtccctcgggctgactatcccgccacacatcatgcgctcccgagacccc
cgcctactcctgaccacggtctttgcgtcctggctgccgctctcgacggccatgctggtt
tccgtcatcgagtccctgccatcacccccagtcgcgcaagccgagagactgcccgagatg
ctggaagacgtccccggctcagatgctatcaacgaagagatcaagaacgccatgatctcc
ttcaaaaccggcccgtcggaccccgtcgtggcctacgttagtaaaatggtttctgtcccc
gaaagcgaactcccccacaacaagcgcaagccaggccagttgaccgccgacgaggcgaga
gaactcgcccgtaagaagagagcagaagcggctcgcgcccaagccgcggcacctaccagc
ggaaacgaaatcaacgaccttacgacggcgctcgaggaggtcaacctggacggctacgct
cctgagcacgaagagaaggaagtcgaccccgagcacctcatcggcttcgcccgcatgtac
tcgggcactctctccgtcggcgacagcctctgggtcatccctcccaaatggtctcccgcc
aaccccaacgcccagccctcgccgaagcaagtcaccgtcacggcgctctacatgctcatg
ggccgcaacctcgagtccctagactccgtcccggcaggcgtcgtcttcggcatcggtggc
ctcgagggccacctcctcaagaacggcaccctctgcagccgcctcgacggcgccgtcaac
ctcgccggcgtggcaggtacattgggcaaacccatcgtccgcgtcgccctcgagcccgtc
aacccggccgacctcgacaagatgatccacggcctccgcctcctcgtccagtccgacccc
tgcgcagagtacgagcagttcagcagcggcgagcacgtccttcttaccgccggcgagctg
cacctcgagcgctgcctcacggatctcaaggagcgcttcgcccgctgcgacatccaggcc
ggcgcccccatcgtgccctaccgcgaaaccattgtccgcgccgaggagatgcggcccccc
gcgaataaggacctcggccgcggcgtcgtcgtcggcaccacctcgtccaagcaagtctcc
atccgcctccaggtccgtcctctgccgtccgacgccacggacttcctcctcaagaacggc
gacgtcatcaaacgcatgtactctgatcgcacacccgccaccaacaacaccacggccgaa
gaaacccagggtactgaaggcacaggcgccaccgcccccggcgaagaaaagatcgacgtc
gacacagacctgacagccgcaaagacaatgtccctcgacgacttcaaaaccggcctccaa
tccgccctcgaatcctcccgcggcggccgcgaacacttcaagtccgccatcgaccgcatc
gccgcctttggcccccgccgcaccggccccaacatcctcatcgacgccacaaaagaaggc
ctcctcgcaaagctcttctcccagacagcctcctcggaacgcgacggctcagcagcaccc
caagcagacgaagccctccacccggcccacgtagccgacaaaatcccctacgccttccag
ctcgccacggcccagggccccctctgccacgaacccgtccgcggcatcgccgtcttcctc
gaagacgtcgtcatcaaccccaccgaagacgaatcctccgcccgcgaccgcctcccccgc
ctgacgggcgaaatcataaagaccttcacgtcctccctccgctccggcatgctcgactgg
tccccgcgcctgatgctcgcaatgtacaccgtcgaaatccaagcctcgacggaggtcctg
ggccgcgtctacgacgtgctcacccgccgccgcgggcgcgtcctctccgaggcgatgaag
gaaggcacgcccttcttcagcatcaactctgtgctaccggtggccgagtcgtttggcttc
gcggacgagatgcggaaacgtacgtcgggcgcggcgcagccgcagcttatttttgcgggg
tacgaggtgcttgaccaagatcccttttgggtgccgtttacggaagacgatttggaggat
ttgggcgagttggcggataaggagaatgtggccaagaggtatatggacggcgtgaggagg
aagaaggggttgttggtcgagggtaggaacgttgctagggatgcggagaagcagaagact
ctcaagaggtag
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