Colletotrichum lupini: CLUP02_02790
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Entry
CLUP02_02790 CDS
T08561
Name
(RefSeq) RNA recognition domain-containing protein
KO
K03258
translation initiation factor 4B
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_02790
03012 Translation factors [BR:
clup03012
]
CLUP02_02790
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CLUP02_02790
mRNA cycle factors
Stress granule specific factors
CLUP02_02790
Translation factors [BR:
clup03012
]
Eukaryotic type
Initiation factors
eIF-4
CLUP02_02790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
73336828
NCBI-ProteinID:
XP_049138961
UniProt:
A0A9Q8SH64
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All DBs
Position
2:complement(join(1396709..1397874,1397928..1398224,1398276..1398374,1398506..1398547,1398667..1398723,1398801..1398804))
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AA seq
554 aa
AA seq
DB search
MAPKKKEQVKMALGDFLQDSSYGGSWADEVEDTYSTQALPAPERAGYRPSQGGWGSGGGD
RGDRSERRDYGGYSSIRENLPQQLPERPPYTAHLGNLSYDATEETVNEFFEGCDIISVRI
IEDREQQRPKGFAYAEFKDLEGLKQALTLDGQTFQGRAIRIKVADPPRGGNRDGESNRDF
SDWSRKGPLPDLPGRGGNDRRPSDFGERRGPREPREPREDDGKVRDFGNWERRGPLSPVA
PKEGSGSRDGSRPRTNDGPREFRDRRQSPAAWGEGQGPRQDSRPPRPERVPTAAETDSQW
RTKMRPDAAQSRDGSEAPSSPSAAPAAPVGRPKLNLAKRTVSEAPDVTSPSGSDSKASPF
GAARPIDTAAKERLIEEKKQQQAKEKREAEEKAKEERRLAKEAAAKEAEEKAEQEAAAKE
KAEKEAAEAPKEEVAQETAADKENGTSEEQKIPVRAKEPREPKEAPKSRAAEANSWRSSG
ASRGAPTGPRGGRGGPRGGGRFEGGRPPRSNGPAEKQAPAAAGSESGDAAPVEDDGWTTV
PNKGRRNVGPRGTA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagaagaaggagcaggtcaagatggcccttggcgacttcctgcaggactcc
agctacggcggatcatgggctgatgaggtcgaggatacgtacagcactcaggctctcccc
gctcccgagcgcgctggctaccgtcctagccaaggtggctggggtagcggcggcggtgac
cgtggtgaccgttccgagcgcagagactacggtggttactcttccatccgcgagaacctt
ccccagcagctccctgagagacccccctacaccgcccaccttggcaacctgtcctacgat
gccaccgaggagaccgtcaacgagttcttcgagggctgcgacatcattagcgtccgcatc
atcgaggaccgcgagcagcagcgccccaagggcttcgcctacgccgagttcaaggatctc
gagggactgaagcaggctttgactctggatggccagactttccagggacgtgctatcaga
atcaaggttgccgatcctccccgtggtggtaaccgtgacggcgaatccaaccgcgacttc
agcgactggtctcgcaagggtcccctgcccgacttgcctggacgtggtggaaacgatcgt
cgcccctccgactttggcgagcgccgtggcccccgtgagcctcgcgagccccgtgaggac
gacggaaaggtccgcgactttggcaactgggaacgcagaggccccctttcccctgttgct
cccaaggagggctctggctcccgcgatggcagccgtccccgtaccaacgatggaccccgc
gaattccgcgaccgccgccagtcccccgccgcctggggtgagggtcagggaccccgccaa
gactcccgtcctccccgccccgagagagtccccactgccgccgagaccgacagccagtgg
agaaccaagatgcgtcccgatgctgcccagtcccgcgacggcagcgaggcgccttcttcc
ccttcagccgcccccgccgctcccgtcggccgtcccaagttgaacttggcgaagcgcacc
gtttccgaggctcccgacgtcacgtctccctccggatctgactccaaggctagccccttc
ggtgctgcccgtcccatcgacactgccgcaaaggagcgcctgattgaggagaagaagcag
caacaggccaaggagaagcgcgaggccgaggagaaggccaaggaggagcgtcgccttgcc
aaggaggccgctgctaaggaagccgaggagaaggccgagcaagaggccgctgccaaggag
aaggctgagaaggaggccgctgaggctcctaaggaggaggtcgcccaggagactgctgcc
gacaaggagaatggcacatctgaggagcagaagattcctgtcagagccaaggagccaaga
gagcccaaggaagcccccaagtctcgcgctgctgaggccaacagctggagatcatctggt
gcctcccgtggtgcccctactggacccagaggtggacgtggtggaccccgtggtggtggc
cgattcgagggaggccgccctcctcgttccaacggccctgccgagaagcaggctccggct
gccgctggcagtgagtctggcgatgctgcccccgtggaggacgatggttggaccacggtc
cccaacaagggccgtcgcaatgttggaccccgtggcactgcctag
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