KEGG   Colletotrichum lupini: CLUP02_02987
Entry
CLUP02_02987      CDS       T08561                                 
Name
(RefSeq) SNF2 super family protein
  KO
K10841  DNA excision repair protein ERCC-6
Organism
clup  Colletotrichum lupini
Pathway
clup03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clup00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLUP02_02987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clup03036]
    CLUP02_02987
   03400 DNA repair and recombination proteins [BR:clup03400]
    CLUP02_02987
Chromosome and associated proteins [BR:clup03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    CLUP02_02987
DNA repair and recombination proteins [BR:clup03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      CLUP02_02987
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD
Other DBs
NCBI-GeneID: 73337025
NCBI-ProteinID: XP_049139158
LinkDB
Position
2:join(2392314..2392317,2392894..2394228,2394280..2396480)
AA seq 1179 aa
MNLGARNLEYRAWVYENSPSSDLKMSSDKEDGGIVAEKISEESAPSSTEADAPRTTAVQF
EGDEAAFLRTITADIRDQDDLERDITTQANAALIEAEDKKDKQRIEKLETTKDKLEAKRV
DQRKKLEGARRNPYQSRIIQKELDKLDLEIENAINDISDCQARIDKRQEEIAIVEDPVKS
KSKRLAGESHREYLVRTGKITPFANIGGERPDGFEGELADVLVEAEQDAAAEEYQSDDEE
PKSHQVLRMPGFAEHPEAAPAFVETEFSLRPRKKRKMDEGASSDEFDASTVSSAESQYAS
DTSEEEATGRKRKKGTNTDKKNKHKKAAENTVTVGNTKVDLSSVDDGNEAIYQARLADWV
RRRSAARQQQSANAAGDASIEDNGEEEWFKPSPDQPDHEFGNGLRLPGDIHASLFAYQKT
GVHWLAELYEQGVGGIIGDEMGLGKTVQAIAFVAALHYTKKLDKPVIVVVPATVMQQWVN
EFHRWWPPLRVSILHSSGSGMVNVAEDDDDEDYPGDRTNRDAAERIVRRVAKHGHVLVTT
YAGLNTYGEQLLSLEWGYAILDEGHRIRTPNANVTYQAKCLNTPHRLILSGTPIQNNLTE
LWSLFDFIFPMRLGTLVNFRQQFEIPIKMGGHANATNLAVMTAEKCATTLKETISQYLLQ
RLKVDVASDLPEKTEQVLFCKLTPEQNEEYVRFIHSDAVSQIMAKKRQSLYGIDILRKIC
NHPDLVSVNRKNQPGYDWGSPRRSGKLQMVGDLLPMWKKFGHKTLLFSQTKIMLNIIQDY
IGKMEGMNYLRMDGDVTIEKRQILIDKFNNDPSIDVFLLTTKVGGLGVNLTGATRIIIYD
PDWNPSTDLQARERAWRLGQTKPVAIYRLMTSGTIEEKIYHRQIFKQFMTNKVLKDPKQR
ANFDLSDLYDLFSFGDNSHSMASANRSKVFEGAEVKFNQSEGHNQLEKPSKNAVPISSVK
AEDEVDTVRKLSGVAAMEEFTEPTDDSEEKRITENLFSRTVDSAYEHDQIMNGKKKVQAD
QAMNRHEANKIAAQAAAHLRRAGEAARRIPIGTVTWTGEIGEGGRPTAPRRRGVNSSAVM
SSLADRQGLSQPASGSSSRGNTPGTDKPLKEKDFIPLIQTFMRRQGGKAVTKMLVDHFNP
YCKTPKQTDDFKSALDRVAVLGKTGGTGRGTWTLKPAFK
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgaatcttggggctcgcaatctggaatatcgggcatgggtttatgaaaactctccgtca
tcggatctcaagatgtcgtccgacaaagaagatggcggcatagttgccgagaagataagt
gaggaaagcgcaccctctagcactgaagcagatgcacccagaaccacagcagttcagttt
gagggagacgaggcggcatttttgcggactatcacagccgatatccgggatcaagatgat
ttagagcgcgatatcacaacacaggccaacgccgccttgattgaggcagaagacaagaag
gataagcagcgcattgaaaagctggaaaccactaaagataaacttgaggcaaaaagagta
gatcaacggaagaagctggaaggagctcgacgtaacccttatcagtcacggatcatacag
aaggagctcgataagctggacctagagattgagaatgccatcaacgacatctcggactgc
caagctcgcatcgataagagacaggaagagattgcgattgtggaggatcctgtcaaaagc
aagtctaaacgcttggccggcgagtcgcaccgagaatacctcgtccggaccggaaagatc
acgccctttgccaacattggtggcgaacgacccgatggtttcgaaggcgagctagcagat
gttcttgtcgaggccgagcaagacgcggctgcggaggaataccagagcgacgatgaagag
ccaaagtctcatcaagtattgcgcatgccaggctttgctgaacatccagaagcagctccg
gcattcgttgagaccgagttttctctacgaccaagaaaaaaacgcaagatggatgaagga
gcatcgtccgatgaattcgatgcatcgactgtgagttcggctgaaagccagtacgcttcg
gacactagtgaggaagaagccacaggtcgcaagcggaagaagggcacaaatacagataag
aagaacaagcataagaaggctgcggagaatacagtcaccgttggtaatacaaaggtcgac
ctgagcagcgtcgacgatggaaatgaggcgatctaccaagcacgccttgctgattgggtc
aggagacggagtgcagctcgtcaacagcaaagtgccaatgctgctggcgacgcctcaatt
gaagataatggcgaggaggaatggtttaaaccctcgcctgatcagcctgaccacgaattc
ggtaacgggctgaggctcccgggagacattcatgcgtcgctgttcgcgtatcaaaagacc
ggcgttcattggctcgctgagctttatgagcaaggcgtaggcggcatcatcggggacgag
atgggccttggaaagacagtgcaagcaattgctttcgttgcggcgttacactacaccaag
aagctcgacaagcccgtcatagtagtcgtccccgcgactgtcatgcagcagtgggttaat
gaattccaccgatggtggccccctctgagagtgtcgattttacactcgtctggtagcggc
atggtcaatgtggctgaggatgatgacgatgaagattatcctggagataggacgaatcgt
gacgccgcagagcgtatcgtcaggcgcgttgccaagcatggacacgttctggtcaccacg
tacgctggcttgaacacctatggcgagcaactgctgtccctggaatggggctacgccatc
ctcgacgagggccacaggattcgcacccctaatgcaaatgtcacatatcaagccaagtgt
ctcaacacaccacaccgcctgatcctgtcgggtacgccaatccagaataacctcaccgag
ctgtggtctttattcgatttcattttccctatgcgactagggactctggtcaacttcaga
caacagtttgagattcctatcaagatgggtgggcacgcgaatgcgactaatcttgcggtc
atgactgctgaaaaatgcgcgacgactttaaaggaaaccattagccaatacctgcttcag
cggctcaaggtcgacgtggcatcagacctgccggaaaagacggaacaggtgctgttctgc
aagctaacgccggaacaaaatgaggagtacgtcaggttcattcattcggatgcggtctct
caaatcatggccaaaaagcgtcaatcactctacggaatcgatatcctgcggaagatctgc
aaccatccggatcttgttagtgtgaacaggaagaaccaaccaggatacgattggggaagc
cccagaagatctggcaagttgcaaatggttggcgaccttcttccgatgtggaagaagttt
gggcacaaaacgctgctattctcccagaccaaaatcatgctcaacatcatccaggactat
atcggcaagatggagggaatgaactacctacgcatggatggagacgttactatcgagaag
agacaaattctgatcgacaagttcaacaacgatccctccattgacgtgttcctgttgacg
actaaagtgggcggcttaggtgtaaacctcaccggagcgaccaggatcatcatctacgac
cctgactggaatccgtcaactgacttgcaagcgcgagagagagcctggcgactcggccag
acaaagccagtcgccatttaccggctaatgacttcgggcactatcgaggagaagatttac
caccgccagatcttcaagcaatttatgacgaacaaagtcctcaaagacccgaagcagcgg
gccaacttcgatctctctgacctttatgacctctttagctttggcgacaatagccatagt
atggccagcgccaatagaagcaaggtctttgagggcgcggaggtcaagttcaaccagtca
gagggccacaatcagctggagaagccgtcaaagaacgccgttcccatctcctccgtcaag
gcagaagacgaagtcgacactgtccgcaagctttccggcgtcgctgcaatggaagagttc
acggagcctacagatgacagcgaggagaagcgcattaccgagaatctgttttctcgaact
gtggatagcgcctacgagcatgaccaaatcatgaatggtaagaagaaggtgcaggctgac
caggccatgaatcgacacgaagcgaacaagatagcggcccaggctgccgcccatttgcga
cgagctggagaggctgcgcgccgcatccccatcggaactgtcacctggactggcgagata
ggcgagggaggccgacctactgcaccgcgacgccgcggagtgaattcttcggcggtcatg
tcttcccttgcggatcgtcaggggctcagccagccggccagcggctccagttcacggggc
aatactccaggtacggacaagcccttgaaggagaaggatttcatacccctgatacagact
ttcatgagacgtcaaggaggcaaggcagtgactaagatgctggttgatcacttcaatccg
tattgcaagactccaaagcagacggacgacttcaagagtgcgttggacagggtagccgtc
ctggggaagacgggtggcacgggtaggggtacttggacgctaaagcctgctttcaagtag

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