Colletotrichum lupini: CLUP02_03116
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Entry
CLUP02_03116 CDS
T08561
Name
(RefSeq) snf5/smarcb1/ini1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
clup
Colletotrichum lupini
Pathway
clup03082
ATP-dependent chromatin remodeling
clup03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CLUP02_03116
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CLUP02_03116
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clup01009
]
CLUP02_03116
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_03116
03036 Chromosome and associated proteins [BR:
clup03036
]
CLUP02_03116
Protein phosphatases and associated proteins [BR:
clup01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CLUP02_03116
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CLUP02_03116
SWI/SNF complex
CLUP02_03116
Chromosome and associated proteins [BR:
clup03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CLUP02_03116
PBAF complex
CLUP02_03116
SWI/SNF complex
CLUP02_03116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INO80_Ies4
Motif
Other DBs
NCBI-GeneID:
73337153
NCBI-ProteinID:
XP_049139286
UniProt:
A0A9Q8WCF0
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All DBs
Position
2:complement(join(2767995..2768273,2768375..2770249))
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AA seq
717 aa
AA seq
DB search
MAAPPSTSTPTAAGATASSSASTSASAANDHDGTPRSATAKALPVRDKDSFNKLQVERYV
TRDWHYSVAMKDAQERFEKDMQQTRDKIDDYNLIKTQRLYFPPSKLYGEGYRGYGNGYTD
IDPRMRAPFPAQVIYPSQKPRPGKRQSHPLRWKKRELKKQAEQHEELVPIRIDVDWEKIK
LRDTFTWNLHDRVIPGELFAQHLVEDLGIPLDAQHKPVLDQVTLQMRDQLNDFYPLVFSE
EDALDPELPYSAYKNDEMRILIKLNVTIGGVTLVDQFEWDINNPLNSPEEFAASMTRDMS
LSGEFTTAIAHCIREQCQLFTRSLYSVGHPFDGRPVEDPDLIAAFLPSPLPSVFRPQQQA
KEYAPYLYELSDADLERNEVIFSREQRRQKRSINRRGGPQLPDLKERQRTIRTLLVSSVL
PGAAPNMEESTLYKRVAGAPPTTRKRPGARDGEVSDSDDSEDSGPDSPGVSQLGGTARTR
GLRGAASAAQQRITNLGRSETPEASIVHHHETRRNLGRSLPHTRDETEEPTQLIVTLKVG
KDKLRRLLQNPRARFTPSGSQTPSTPAHTRIPSAAAAAATSMPPPSTPASNGQALPAQLG
TPLPQGQIGRQPAPPPVAGQPPPPAQTYTFDNFEGMMKYSAINPDTEMPISVPAGSQPPE
GARWMFLPRIRCLDCPGKLYTPGPEMTAGNFEVHLRNKQHRQKVDAREGRDTSAGTT
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccgccatccacgtccacgcctactgcggctggcgcgacagcctcgtcctcg
gcatcaacctccgcgtccgctgccaacgatcacgatggcactcctcgctccgccactgcc
aaggctctccccgtacgagacaaggactccttcaacaagttgcaggtagagcgctacgtg
acgcgcgactggcactactctgtcgcgatgaaggacgctcaggaacggttcgagaaggac
atgcaacagacgagagacaagattgatgactacaacctcatcaaaacccaacgcctatat
tttcctccgagcaaactgtacggcgaaggatatcgtggctacggcaacggctataccgac
atcgatccccgcatgcgagcgccctttcctgcccaagtcatctatccgagccagaagccg
cggccggggaagcgccagtcgcatccgctcaggtggaaaaagagagagttgaagaagcag
gcggagcaacatgaggagctcgtgccgatacgcatagacgttgactgggaaaagataaag
cttcgcgacaccttcacatggaacctccacgacagggttattccaggcgagctctttgcg
cagcaccttgttgaggatctgggcatccctctagacgcacagcacaaacccgtcttggat
caggtcacgttacaaatgcgcgaccagctcaacgacttctaccccctagtcttctccgaa
gaagacgcgctcgacccggagctgccatattctgcttataagaatgacgagatgaggata
ttgatcaagctcaacgttaccattggcggcgtgaccttggtcgaccagtttgagtgggat
atcaataatccactcaactccccagaggaatttgccgcctcaatgactcgcgacatgtca
ctgtccggcgagttcaccaccgcaattgctcactgcattcgggagcagtgccaactcttc
actcggagtctgtacagcgttggacatcccttcgacggcagaccggtcgaagaccccgat
ctcattgccgccttcctgccgtctccgctgccatccgtattcagaccgcagcagcaggcg
aaggagtatgcgccgtatctttacgagctcagtgatgccgacttggaacgcaatgaggtc
atcttctctcgggaacagagacggcagaagcgatctattaaccgacgtggtggccctcaa
ctgccggacctcaaggaacggcagcggacaatcaggacgctcctcgtctcgtccgtgctt
ccaggtgctgcgcctaatatggaagagagcacgttgtacaagcgtgtggccggcgcgcca
cccaccacccggaagaggccaggagcacgcgatggcgaggtttccgattccgacgatagt
gaagactcaggaccggactcgccaggcgtgtctcagcttggcggcacggccaggacgaga
ggtcttcggggcgccgcgagtgctgctcagcaacgcatcacgaatctcggccgctccgaa
acgcctgaagcgagcatcgtccatcatcacgagactcgcagaaaccttggccgctccctt
ccccatactcgcgatgagactgaagagcctacacaacttattgtcacactgaaggttggc
aaggacaagctgaggagacttctccagaacccaagagcgaggttcactccgagtggctct
cagacaccgtcaacacccgcacacactcgcatacctagcgcggccgcggctgcagcaacc
tccatgcctccgccgtctacgccggcctcgaatggccaggctcttcctgctcaacttggc
actcctctgcctcaaggccagattggtcgacaacctgctccgccgcctgttgccggtcaa
ccgccaccacctgctcaaacgtacacctttgataactttgagggcatgatgaagtactca
gccatcaatcctgacacagagatgccgatatcagtaccagcagggtcacagcctcccgaa
ggcgccagatggatgttcctcccccgtatccgttgtcttgactgcccaggcaagctgtac
acacctgggccggaaatgacggcaggcaacttcgaggttcacttgcgcaataagcaacat
cgtcaaaaggtggatgctagagaaggcagagacacgtcagctggaacgacttaa
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