Colletotrichum lupini: CLUP02_03216
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Entry
CLUP02_03216 CDS
T08561
Name
(RefSeq) DNA repair and recombination protein pif1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clup03032
]
CLUP02_03216
03029 Mitochondrial biogenesis [BR:
clup03029
]
CLUP02_03216
Enzymes [BR:
clup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CLUP02_03216
DNA replication proteins [BR:
clup03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CLUP02_03216
Mitochondrial biogenesis [BR:
clup03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
CLUP02_03216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
AAA
AAA_7
Herpes_Helicase
AAA_5
AAA_16
NPHP3_N
ABC_tran
PhoH
NB-ARC
nSTAND_NTPase5
UvrD_C_2
RNA_helicase
T2SSE
AFG1_ATPase
ResIII
RsgA_GTPase
AAA_25
NACHT
ATP-synt_ab
ArgJ
AAA_14
ATPase_2
Mg_chelatase
TsaE
ORC-CDC6-like
AAA_29
SH3_13
AAA_11
Motif
Other DBs
NCBI-GeneID:
73337251
NCBI-ProteinID:
XP_049139384
LinkDB
All DBs
Position
2:complement(join(3096821..3097839,3097903..3099625,3099828..3099857))
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AA seq
923 aa
AA seq
DB search
MIIGDKSYKQTQIEFFPSSVSVRYSKASHVQSHTTNVNKTAPRMTAGITSLFPIRYPPVL
RQLTHRAAIRVAHVHTSASHPDLGPHTDSMLARAKKAYEASAPPPQKNELAKQLFPSSSP
SATQNGNIIDQFKKTNPTTTAPPATTNSIRPPPGRTASVTHFASSNRSALDSISAPNGKS
FASLYTRSDSFRDEPDNISTQSGQANSKPAVYFAEDDFSDDDQLDLDFEAPSALPSLPKP
PVVAKKASNPPPEEPSTQVLPWSSSPASHFVHPQLSRTTSAESSLKRESPENFESQVAPQ
PKKRKLPTKWKVEEDFIPVPQDEPEVSRWADGGVTPAPKKKKETWNMTASALKEQKKQLK
TQSKKTANEEEWSMDQIRAEVTKSNQPKAKASVIALTQEQKHVQDLVVNKGQSVFFTGPA
GTGKSVLMRSIIAELTKKWARDLERLAVTASTGLAACNIGGQTLHSFSGIGLGKEDVQAL
VKKIRRNPKAKNRWLRTKILVLDEVSMVDGDLFDKLSQIGRTIRNNGKPWGGIQLVVTGD
FFQLPPVPDGDKGRDSKFAFEAATWNTTIDHTIGLTQVFRQRDPVFANMLNEMRLGRITD
ETVQTFRSLARAIPATDGLEVTELFPTRYEVENANQSRLRRLPGIPKRYDAADSGDPQIR
DKLLQNMMAPKMIELKVGAQVMLIKNMDDTLVNGSLGKVVNFMSEDDFEHWNPVLMMQSV
EDIDEDGEARARRKIKAFSREVEQATRGKAEYPVVEFAAVDGCTRTILCVPEDWKVELPN
GEVQASRSQLPLILAWALSIHKAQGQTLERVKVDLGKVFEKGQAYVALSRATCQQGLQVL
NFRKDKVMAHPRVVGFYNKLYSADVAIAKKPPSMADFLHKEKDTKPVRSTSGVSARSQSF
VRKGVEVIDLDEEEEAMASYGGF
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcggggataagtcgtacaaacagacgcagatcgaattctttccttcctcggtc
agcgtgcgatacagcaaagcctctcacgtacagagtcacacaacaaacgtcaacaagaca
gcccctcggatgacggctggaatcaccagcctctttcccattcgatatccgccagtactc
cgccaactcacccaccgagcagcaattcgtgtcgctcatgtccacacctctgcctcccat
ccggatctaggtccgcataccgattcgatgttagccagagcaaagaaggcctacgaggcc
agcgctccgccgccccagaagaatgaattggccaagcaactgtttccctcgagcagcccc
agcgccactcagaatggaaatatcatagaccagttcaaaaagacgaacccgacgaccacg
gcgccacccgcgacgacgaactcgatacgacccccgccgggcaggactgcaagtgtaacg
cacttcgcaagcagcaatcggtctgctctggattctatatccgcgcctaacggcaaatct
ttcgcctctctctataccaggtctgactcttttcgagacgaaccggataatatctccacc
caaagtgggcaggccaactcgaaacccgctgtgtattttgccgaagatgacttcagcgac
gacgaccagcttgacctggacttcgaagccccgtcagctctaccatcactccccaagccc
cctgttgtagcaaagaaggctagcaacccgccgcccgaggaaccttcgacacaagtttta
ccgtggtcctcgtctcccgcatcacatttcgtccaccctcaactatcacgcaccacatct
gccgaaagctcactgaagcgtgagtccccagagaacttcgagtctcaagtggcgccgcag
cccaagaagcgcaagttgccaacaaaatggaaagttgaggaggacttcatcccagtgcca
caagacgagccggaggtctctcgatgggcggatggtggtgtcacgcctgctcccaagaag
aagaaagagacctggaatatgactgccagtgccctcaaggagcagaagaaacagctgaaa
acacaatccaagaaaaccgccaatgaggaagagtggtccatggaccagattcgagcagag
gtgacgaaaagcaaccagcccaaagccaaggcatcggtaattgctctcactcaagagcaa
aagcacgtccaagacctcgttgtcaacaaaggccagagtgtcttctttacaggtccggcc
ggaactggaaagtcggtcctgatgagatcgatcatcgcagagctcacgaagaaatgggcg
agagatctggaaaggctagctgtcacagcgtcgacaggcctcgcagcctgcaatatcgga
ggccaaacactgcatagcttttctgggattggccttggcaaggaagacgtccaggcattg
gtcaagaagatccggcgaaaccccaaagcgaagaaccgctggcttcgtaccaagatcctc
gttcttgatgaggtctcaatggtggacggcgacctgtttgacaagctttcacaaatcggc
agaaccatcagaaacaacggcaagccctggggcggaatccagcttgtagttacgggggat
ttcttccagctgcccccggtacctgatggtgataaaggcagggattctaaattcgccttc
gaagcggcaacttggaacactacgattgaccacacgattggtttgacgcaggtgttccgt
caaagggatccagtctttgccaatatgttgaacgaaatgcgtcttggcagaattaccgac
gagaccgtgcaaacatttagaagcctagctagggcgattcccgccacagatggcctggag
gtcacagagctgttccctacacgatatgaggttgagaacgccaaccaaagtcgactgcgc
agattgcccggaatacccaaacggtacgacgcagccgatagcggagacccccaaatacgc
gacaagttactccaaaatatgatggcacccaaaatgattgagctcaaggttggtgctcaa
gtcatgctcatcaaaaacatggacgatacacttgtcaacggttcccttggaaaagtggtc
aatttcatgagcgaggacgactttgaacactggaatccagtactcatgatgcagagtgtc
gaggacatagacgaggatggagaagcaagggccaggcgcaagatcaaagctttcagcaga
gaagtagagcaggctactaggggcaaagccgagtatcctgtcgtggaattcgcggcggtg
gatggatgtacccgtaccatcctttgcgttccagaagattggaaggttgagttgcctaat
ggcgaggtgcaggctagtcgaagccagttgcctctgatccttgcatgggcactatcgatt
cacaaggcacaaggtcagacattggaacgagtcaaggtcgatctgggcaaagtattcgaa
aagggtcaggcctatgtcgcgctcagtcgagcgacctgccaacaaggcctacaggtcctg
aatttccggaaggacaaagtgatggctcaccctcgggtcgtagggttctacaacaagctc
tacagtgccgacgtagccattgcaaaaaaaccgccgagcatggctgatttcctgcacaag
gaaaaggacacgaaacccgtcaggagtacttctggagtgagcgcgcggtctcaatcgttt
gtgaggaaaggcgttgaggtgatcgacttggacgaggaggaggaggcaatggcgagctac
ggcgggttttaa
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