Colletotrichum lupini: CLUP02_03243
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Entry
CLUP02_03243 CDS
T08561
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
clup
Colletotrichum lupini
Pathway
clup03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CLUP02_03243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_03243
03012 Translation factors [BR:
clup03012
]
CLUP02_03243
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CLUP02_03243
Translation factors [BR:
clup03012
]
Eukaryotic type
Release factors
CLUP02_03243
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
MaoC_dehydratas
Motif
Other DBs
NCBI-GeneID:
73337278
NCBI-ProteinID:
XP_049139411
UniProt:
A0A9Q8SI00
LinkDB
All DBs
Position
2:complement(join(3162262..3162641,3162737..3163351,3163740..3163759,3163870..3163984,3164126..3165257,3165324..3165373,3165440..3165524,3165631..3165666))
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AA seq
810 aa
AA seq
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MSDPQANEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEYGTA
SNIKSRVNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTQEGKERKVNIDFEPFKP
INTSLYLCDNKFHTEALAELLESDQKFGFIIMDGNGALFGTLSGNTREVVHKFSVDLPKK
HGRGGQSALRFARLREEKRHNYVRKVAELAVQNFITNDKPNVAGLILAGSADFKTDLNAS
DLFDNRLATKVIKVVDVSYGGENGFNQAIELSSETLGNVKFIQEKKLIGKYFEEISQDTG
RVCYGIEDTLKALELGAVEVLIVFENLEITRWKLKDSQGTEHLLHTTKQQETGDRAIFMD
KETGQEMEVVTQESFLEWIAEHYKDFGTNLEFVSDRSTEGNQFVKGFGGIGGILRYKVNF
EQLAEVDDDDDYYDASQPAPAPKPNVAHQLLADRSPMSPAHLTHQVARPSPLRQRTLKSA
ANANFNMRPLLLNTLRRGFATQNASSSVEAGIAHVLHTSKEIPDHLSPTPSHLLNLLFAD
IFTSSADYPPKYPPSSGPASPLPQGHHLAYFPLQSPPSWLMPDGTDPDHCPGAPFTRRLW
AGGEVRFREGWEDVLRLDGRRVGCVESVEDVRAEKGRVWVELWRRYGASSAAGRGESGPA
VEERRTLAFLPDVDVSGPARRSLKAPHKPTASLTLTPTQNLLTNFSALTYNAHAIHLDPA
WAAQEGHPATLVHGPLSLALVLAFLNRQGKGQSVRWYGYRNLAPLYCGREMTLCLREKEA
SEGERKWDVWIEGDDGGMAVKGTATTVDGV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacccccaggcgaacgaggccgagaagaacatcgagatatggaaggtcaagaag
ctgatcaagcgcctcgaggccgctcgtggtaacggcacttccatgatctcgctcatcatt
cctcccaaggatcagatttcccgagccgccaagatgttggctgaagaatacggaaccgcg
tcaaacatcaagtccagagtcaacagacagtccgtgctttcagccattacctcgacccag
cagcgtctcaagctgtacaataaggtccctcccaacggcttggttgtctactgtggtgaa
atcttgacccaggaaggcaaggagagaaaggtcaacatcgactttgagcctttcaagccc
atcaacacctccctttacctctgtgacaacaagttccacacagaggctttggccgagctt
ctcgagtcggatcagaagtttggtttcattattatggacggtaacggagcccttttcgga
accctttccggaaacaccagagaagttgttcacaagttctctgtcgatcttcccaagaag
cacggtcgtggtggtcaatccgctcttcgtttcgcccgtcttcgtgaggagaagcgtcac
aactatgtccgcaaggttgccgagttggccgtccagaacttcattaccaatgacaagccc
aacgtcgctggtctgattttggctggttctgccgatttcaagactgatctcaacgcctcc
gacctgttcgataaccgtctggccaccaaggtcatcaaggttgttgacgtttcctatggt
ggtgagaacggtttcaaccaggctatcgagctttcttccgagaccctcggcaacgtcaag
ttcatccaggagaagaagctcatcggaaagtacttcgaggagatcagccaggacaccggt
cgtgtctgctacggtattgaggataccctcaaggctctggagttgggcgctgtggaggtt
ctgatcgtcttcgagaacttggagatcacccgctggaagctcaaggacagccagggcacc
gagcacctgctgcacactacaaagcagcaggaaaccggtgaccgtgccattttcatggac
aaggagactggccaggagatggaagtcgttacccaagaatccttccttgagtggattgca
gagcactacaaggacttcggtaccaacctcgagttcgtctctgaccgttccaccgagggc
aaccagttcgtcaagggctttggtggtatcggtggcattctccgctacaaggtgaacttc
gagcagttggctgaggttgatgacgacgatgactactacgacgcgtcgcagcccgcgccc
gcgcccaagccgaacgtcgcccatcagctccttgcagacaggagcccgatgagcccggct
cacctcacccaccaagtggcgcgcccgagcccgcttcgacagaggacactcaagagcgcc
gccaatgccaacttcaacatgaggcctctgctcctcaacacccttcgtcggggattcgca
actcagaatgcatcctcatcggtagaggcaggaatcgcccacgttctgcacaccagcaag
gagatcccagaccacctctccccgacgccctcccatctccttaacctcctgttcgctgac
atcttcacctcgtccgccgactatccaccaaagtacccaccatcctccgggcctgcgagt
ccgttgccgcaaggccaccacctggcctatttccccctccaatcgccgccctcatggctg
atgccggacggcactgacccagaccattgccccggggcgccctttacgcgccggctctgg
gcgggcggcgaggtccggttccgagagggctgggaggatgtgcttcgtctggatgggcgc
cgggtcggctgtgtcgagagcgtggaggatgtgagggccgagaagggccgggtgtgggtc
gagttgtggcggcggtatggggcatcttctgctgctggtcgtggcgagagcggaccggcg
gttgaggagaggaggacgttggctttccttcctgatgttgatgtttctggtccggcgcgg
cggagtttgaaagcgccgcataagccgacagcgtctctcactctgacgccgacgcagaac
ctcctcaccaatttcagcgcgctgacgtacaacgcgcacgcgatccatctggacccggcg
tgggctgcgcaagagggccatcccgcgacgctggtccacgggcctctgtcgctggctctg
gtgctcgcgttcttgaacaggcagggcaaagggcagagcgtgcgctggtacgggtaccgg
aacctggcgccgctgtactgcggtcgggagatgacgctttgcctgcgagagaaggaggcg
agtgaaggggagaggaagtgggatgtttggattgagggtgatgatggagggatggcggtc
aaggggactgctacgaccgtcgatggcgtgtga
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