Colletotrichum lupini: CLUP02_03433
Help
Entry
CLUP02_03433 CDS
T08561
Name
(RefSeq) translation initiation factor 4F
KO
K03260
translation initiation factor 4G
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_03433
03012 Translation factors [BR:
clup03012
]
CLUP02_03433
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CLUP02_03433
mRNA cycle factors
Stress granule specific factors
CLUP02_03433
Translation factors [BR:
clup03012
]
Eukaryotic type
Initiation factors
eIF-4
CLUP02_03433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
eIF_4G1
HypF_C_2
Motif
Other DBs
NCBI-GeneID:
73337465
NCBI-ProteinID:
XP_049139598
UniProt:
A0A9Q8WCU3
LinkDB
All DBs
Position
2:complement(join(3731819..3731927,3731985..3732334,3732391..3736047,3736123..3736838,3737736..3737760))
Genome browser
AA seq
1618 aa
AA seq
DB search
MGRGLLHWAIVPVAAPWTTIRHRRQLRFDTVLHQRYFLHEQTRYDEIPHMTSTASPQSNP
APTPSAATSAPSYASAAGANKKQASTPLIATGSNPPVVVGGSSAQNAKPSAPSPVNGRPP
ITPAVPAAPAVPHGSSANNMNGSAPDHARKSSVTLSANGPNSFAPNGGPVGGAKPGIQFG
YNSPAVAHSTPQATAAPIPIPGSNQRVPSPAHSPSPIPQPSASGGRPPSGMAQPNAMTFG
SLGSDGDRHMRQASTPQSQAALPAMPGQHIRRESGVSQHSDAPGPNQGPGRGGFQPQGGR
GRGFNPHQPPYQANMGFPPNQQQYRNGQGRGGMPPAFHPGRPMQPYPNSPQPARSPALAH
SQPGHSQPGTPNMPPAQMHPMPMPAPSPQYYQQGPPPNVIPPPFQDLSVQSSLGAAFVPS
FKSKKKNLKHWEKSSQVKSRHVDSSHDLPFDSSRPRRHNKHGEQLWAERNGLNPSYCSDF
GDYGITELAYVSTEPSGFCQLSRPPVPPIDLSPESGNYERLLTQTKAQYGYPPQANHQFD
QFGRPIYYNQMGYMPSPGAPPAFQPGYAPPAFHQPAPTAMSRTSSHSERPSSSTGQPSQP
VVVSGTPQPQNAQVKPPVVASSGNFVRPKKSAAIVIKNAAGEAVDFKKSIKTPSSPAPPI
VQQSKTPPIVSSTPTPPPKSATPSHARTDSQATPKTRQEIQDELRAKIQQAKGGEDKAKE
EADAKAKAADEEKKAAEAKEEARKAEEKAKEDARKAEEEAEAKRKADEEEKAKAAAAEQE
KKAAEAKAKAEAEKAAEKPAEKPAASAADEEDEMERMIREMEEEDARREKAAAEYAAKKQ
AEKEAQKKLDEANKATNAAEADRKLREAEREMERLEEEKERKRAQGGNTPSVAELLAGKT
GDSEPAKVGDVADKLSSLSIGDSKASTPTEASAPKATPTEKRGPKPSPLNLAPLNTKPVE
PPQPSAALQSLKSARFLTVMNQDLYPAGISSPNPALNAAVTKKGKTFKYDAQFLLQFQKV
FTEQPSTEFHQQVKSLIGDNDGSRSASTPRAGSGRGGSQRGAAAPQVGAMGSFRGPSNNV
RGTTSAERFAMANAAMGSGGGPVGNMGTFRQFPGPQMVNRTPSSSNMGPNSPRTRSARGG
GSRRNDYNAKDAQAAKTMPLTAGMELKPITVSASGWKPTSVGKGPSVSGPTPGGDHMDPQ
MVQRKVKAALNKMTPEKFDKIADQILAIAGQSKDESDGRTLRQVIQLTFEKATDEAHWAS
MYAKFCKRMLDTMSPEIRDENIKDKNGVVVSGGALFRKYLLNRCQEEFERGWKVNLPTKP
EEDEGKPQTNEAAMLSDEYYIAAAAKRRGLGLVQFIGELYKLGMLTERIMHECVRKLVDY
EGIPDEAEIESLSKLLRTIGNNLDASEKGKALMNVYFDRIQHMMDMPELPSRLKFMLLDV
LDLRKAGWASKEANKGPKTLDEIRAEAEAAAAQKAMENQRGGSQRGPGGRPNVGRGDSRN
FSSGYMQAQSNQVGMDDLRRLKGSTSRAASGNISLGPTSMFSSRSNSGRRLGPGGSLGRP
GEDSGASSRTGTPPTTQHQNAFSALANLDSETPASPPSTAASPALSKAVPDSSAAESK
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggggccttcttcactgggcgatcgtcccagttgccgcaccttggacaactatc
cgacaccgacgtcagcttcgtttcgacacggttcttcatcaacgctactttctacacgaa
cagacgcgctacgacgagattccacatatgacttcgactgccagccctcagtccaacccg
gcgcccaccccctctgctgcgacttcggctccttcatatgcttccgctgccggtgcgaac
aagaagcaagcctccacgccgctgattgcgacgggatccaacccaccagtggtggtcggt
ggctcctctgcgcaaaatgcaaagccgtctgctccgtcaccagtaaatggacgtcctcct
atcacacctgctgtgcctgctgcccctgccgtccctcacggctcttccgccaacaacatg
aacggaagcgcacccgatcacgctcgcaagagctccgttaccctcagcgccaacggcccc
aacagcttcgctcccaacggcggacccgtcggtggtgcaaagcccggcattcagttcgga
tacaactctcctgctgtcgcgcacagcacccctcaagctaccgccgctccgatccctatt
cctggatccaaccagagagtgccttctcccgcgcactctccctctcctatccctcagccc
tctgctagcggtggccgtcccccttcgggcatggctcagcccaacgcgatgacctttggc
agtctcggaagcgatggcgatcgccacatgagacaagcctctactccccagagccaggcc
gctcttcctgcgatgcccggccagcacatccgacgcgagtccggcgtttctcagcacagc
gacgcccctggtcctaaccaaggcccaggccgtggaggtttccagccccagggcggccgt
ggtcgtggtttcaaccctcaccagcccccgtaccaggctaacatgggattccccccgaac
caacagcagtacagaaacggccagggccgcggcggtatgccgcctgccttccaccccgga
agacccatgcaaccctacccgaactcgcctcagccggcccgaagccctgctctggcccat
tctcagcccggccactcccagcccggaaccccgaacatgcctccggcgcagatgcatccc
atgccgatgccagctccctctcctcagtattaccagcagggcccgcccccaaatgtaatt
ccccctccctttcaagatctttctgttcagtcgagtctgggtgctgctttcgttccttcc
ttcaagagcaaaaagaagaacctgaagcactgggagaagtcttcccaggtgaagtcgaga
catgtggattcctcgcatgacttgccgttcgactccagcagacctcggcgccataacaag
catggagagcagctttgggccgaacgtaacggtctgaacccgagttactgttcagacttt
ggcgactatggcatcactgagctggcctacgtgtcgactgaacctagtggcttttgtcaa
ctctctcgtcccccagtcccccctatcgatctctctcctgaaagcggtaattacgaaaga
ttgctaactcaaacaaaggcacagtacggctaccctccccaggcaaaccatcagttcgac
cagtttggccgacccatctactacaaccagatgggatacatgccctcgcctggagcgccc
ccggctttccagcctggctacgccccgcctgcattccaccagcctgcgccgactgccatg
tcacgcacctcctctcactctgagcgtccctcctctagcactggccagccgagccagcct
gttgttgtgtctggtactcctcagcctcagaacgcacaagttaagcccccagttgtcgcg
tcatcgggcaacttcgtccgccccaagaagagtgccgccattgttatcaagaacgctgcc
ggcgaagcggttgacttcaagaagagtatcaagactccgtcgtcgcctgcccctcctatc
gtccagcagtccaagactccccccatcgtctcctctacacctactcctccccctaagtcc
gcaacgccctcccacgctcgcacagacagccaggctactcccaagactcgtcaagagatt
caggatgagctgagagccaagatccagcaggccaagggtggcgaggacaaggcgaaggaa
gaggccgatgctaaggccaaggccgctgatgaagagaagaaggctgccgaggccaaggaa
gaagcccgcaaggctgaggagaaggcaaaggaagacgctcgcaaggctgaggaagaagcc
gaagcgaagcgcaaggccgacgaggaagagaaggccaaggctgctgccgctgagcaagag
aagaaggctgctgaggccaaggccaaggcggaggctgagaaggcggctgagaagcctgcc
gagaagcctgccgcctctgccgccgatgaggaggacgagatggagcgcatgattcgcgaa
atggaggaggaagatgctcgtcgcgagaaggctgctgccgagtacgccgccaagaagcaa
gccgagaaggaggcacagaagaagcttgacgaggcaaacaaggctaccaacgctgctgag
gctgaccgcaagctccgtgaggctgagcgcgagatggaacgtctcgaagaggagaaggag
agaaagcgtgcacagggcggaaacaccccttccgtcgccgagctgctcgctggaaagact
ggtgacagcgagcccgcaaaggttggcgatgttgccgacaagctgtccagcctcagcatc
ggtgactccaaggcttcgacccccaccgaggcttccgctcccaaggctactcccaccgag
aagcgtggccccaagccgtcgcctctcaacttggctcccctcaacaccaagcctgttgag
ccgccccaacccagcgctgctcttcagtccttgaagtctgcccgattcttgactgtcatg
aaccaagacctgtaccctgccggtatcagctctcccaaccctgccttgaacgctgccgtc
accaagaaaggcaagactttcaagtacgatgctcagttcttgctgcagttccagaaggtc
ttcaccgagcagccttctacagagttccaccagcaagtcaagtccctcattggtgacaac
gatggttctcgctctgcttctacccctcgtgctggttccggacgtggtggctcccaacgt
ggcgccgctgcacctcaagtcggtgctatgggcagcttccgtggtccctctaacaacgtc
cgcggcacgacttctgctgaacggttcgctatggctaacgcagctatgggctcaggtggc
ggtcccgttggcaatatgggcactttccgccaattccctggtcctcagatggtgaaccgc
actccctcttcctccaacatgggtcccaactctccccgtacccgctctgccagaggtggt
ggcagcagacgtaacgactacaacgccaaggatgcgcaggcagccaagaccatgcctctc
acggctggcatggagctcaagcccatcactgtctccgcttcaggctggaagccgaccagc
gtcggcaagggcccctcagtttcaggacctactcctggcggcgaccacatggatccccag
atggttcagcgcaaggtcaaggctgcactcaacaagatgactccggagaagttcgacaag
attgccgatcagattctggccatcgcgggccagtccaaggacgagtccgatggccgcact
ctccgccaggtgattcagctcaccttcgagaaggccaccgacgaggctcactgggcttcc
atgtacgccaagttctgcaagcgtatgcttgacacgatgagccctgagatccgtgatgag
aatatcaaggacaagaacggtgtcgttgttagcggtggtgccttgttccgcaagtacctt
ctcaaccgttgtcaggaggagttcgagcgcggctggaaggtcaacctgcccaccaagccg
gaggaagacgagggcaagccccaaacgaacgaggccgccatgctttccgacgagtactac
atcgctgctgccgccaagcgtcgcggtcttggtctcgtccaattcattggtgagctatac
aagcttggcatgttgacggagcgcatcatgcacgagtgtgttcgcaagcttgtcgactac
gagggtatccccgacgaggccgagatagagtctctctccaagttgttgagaaccattggt
aacaaccttgacgcttcggagaagggcaaggccttgatgaacgtctacttcgaccgcatc
cagcacatgatggacatgcccgagcttcccagcagattgaagttcatgctcttggacgtc
ctcgatcttcgcaaggctggttgggcttctaaggaggcaaacaagggccccaagactctt
gatgagattcgtgcagaggctgaggcagctgctgcccagaaggcaatggagaaccagcgc
ggcggcagccaacgcggtcccggcggccgccccaatgtcggccgtggcgattctcgcaac
ttctcctctggctacatgcaggcccagtccaaccaagtcggtatggacgacctgcgtcgc
ctgaagggctcgacgagcagagctgccagtggcaacatctctcttggccccacctccatg
ttcagctctcgcagcaacagcggacgcagacttggacctggtggctctctcggccgccct
ggcgaggactctggtgcttcatcccgcaccggcactccccccaccacccaacatcaaaac
gcattcagtgcactcgccaacttggacagcgaaaccccggcttctcctccttcgactgct
gcctctcctgcactgtccaaggctgttcccgacagctctgctgccgagagcaaatga
DBGET
integrated database retrieval system
