Colletotrichum lupini: CLUP02_03436
Help
Entry
CLUP02_03436 CDS
T08561
Name
(RefSeq) guanylate kinase
KO
K12878
THO complex subunit 1
Organism
clup
Colletotrichum lupini
Pathway
clup03013
Nucleocytoplasmic transport
clup03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLUP02_03436
09122 Translation
03013 Nucleocytoplasmic transport
CLUP02_03436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_03436
03041 Spliceosome [BR:
clup03041
]
CLUP02_03436
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CLUP02_03436
Spliceosome [BR:
clup03041
]
Complex C
Other components
EJC/TREX
CLUP02_03436
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CLUP02_03436
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
AAA_18
AAA_28
nSTAND3
AAA
MMR_HSR1
AAA_22
ABC_tran
AAA_5
Rad17
RuvB_N
Motif
Other DBs
NCBI-GeneID:
73337468
NCBI-ProteinID:
XP_049139601
UniProt:
A0A9Q8WBT1
LinkDB
All DBs
Position
2:join(3747794..3747862,3748298..3748579,3748666..3749478,3749528..3749683,3749740..3750639,3750697..3751170)
Genome browser
AA seq
897 aa
AA seq
DB search
MQSSSTSQKFQPCFSGKSHSQMKRSLSTDPKMPAAVTPQRHEVPGVVAFAKLLDGLLARS
MEVKSTPTIEPALQKADFGDLQEQLARVLAIPGVSEENGVGIAIQNKAQQFAIIETAATT
PIESPDFVKVWNLFDLLTVLSDDEKCDPALLFWLVEELLDSQTIAGCRKIFDFLESRRER
ITVKHFKQKQLVILRSCNELLRRLSRAEDTAFCGRVFIFMFQSFPLGDKSSVNLRGEYHT
ENVTVFDDLSAKAEETTEQMDVDSQTGARETESKSQPKAVSFDAKKSLQNDQPLEPDALY
PLFWSLQETFSQPKRLFDPAHLNEFKRGLEATMTSFRAIQSEQGQRPPKAVDEAQRGFKR
KRADVEESDLANSYNPKYLTSRDLFELEMSDISFRRHILVQALIIMDFLLSLSPKTKEKL
AGNAQNKSVIYLGQVLTEEDTKWATEMKKTIVDKYLKHGVDGPYFSRMVETVLARDKNWI
RWKSENCPSIELPAVSPETFDEAKKAAQRTTTKKRLRATPMGSLPLGFLDDGDDERAMKK
LKALERYSLPELESFKGKIANDDFEIDMSNTPQEKAPFIESKASKSWRALRIAGKSRLAS
FDKIDDPEKIDAIFEEPVDVDESEAAEEAVKSEDVPEDKRPIILSGPPGAGKATLFQLLA
SRRPGAFKYVPRHTTRKAQEGEAEGKVFYFVEKQAFNMLRDGDALLEFTTIDDVDYGTSR
KALEAVVEGGKVPVTYMDSEAIQQTRDLGYSARTILILPPSKEVLEERLRKAEKGDLVAD
ALSKAAPYWEEDSKFKDGFDLVLTNEELDATFKTLEEHIYGKAEEAELSNGKPDNEAAVD
EADTIMDDAPVEAPQEPQESQEAQGVEETEKTTEAQETEETKEKVDEAKADEAKEAS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctcgtccacctctcaaaaatttcagccttgcttttcgggcaagtcgcactct
cagatgaagcgcagtctctcgaccgatcccaagatgccggccgccgtcacgcctcagcgc
catgaggtgcccggggtcgttgcatttgcaaaattgctggacggcctcctggctcgctcg
atggaggtcaagtctacccccaccattgaaccagcattacaaaaggcagactttggtgat
ctgcaggaacagcttgctcgcgtgcttgcgattccgggagtctcagaagagaatggcgtc
ggcattgcgattcagaacaaagcccaacaattcgctatcatcgagactgccgccacgaca
cccatcgaatccccagatttcgtcaaggtctggaacttgtttgacctcctgactgtgctc
tccgacgacgaaaaatgcgacccagccttgttattctggctggtggaagaactcctggac
agccaaacaatcgccggatgccgcaagatcttcgactttcttgaatcgagacgcgaaagg
attaccgtgaagcatttcaagcaaaaacaattggtgatccttcgtagctgtaacgaactc
ctgcgacgtctctctcgagctgaggatactgctttctgtggtcgcgtcttcatcttcatg
ttccagagctttcccctgggagacaagagctccgtcaacttgcgaggagaataccatacc
gagaatgtcactgtctttgacgatttgagtgccaaggctgaggagactaccgagcaaatg
gacgtggatagtcagacgggggctagggaaacagagtccaagtctcaaccaaaggccgtt
tcatttgacgcgaagaagtcactgcagaacgatcagccgcttgagccagatgctctgtat
cccttgttctggtctctgcaggagacttttagccagcccaagagattgtttgatcctgcc
cacttgaatgagttcaagcgcggcttagaagcgacaatgacatctttccgagcaattcaa
agcgagcagggtcagcggccgccaaaagcggtagatgaggcccaacgaggcttcaaacgg
aaacgggcagatgtggaagagagcgacttggcaaactcatacaatcccaaatatctgaca
agcagagacctctttgaattagagatgagcgacatttctttccgcagacacatcctcgtt
caagccttgatcatcatggatttccttctctctctttccccgaaaacaaaggagaaactg
gccggcaacgctcaaaataaatcggtgatttacctcggccaggttcttaccgaagaagac
acgaaatgggcgacagagatgaagaagacgattgtcgacaagtacctcaagcatggggtt
gacggtccgtatttcagtcgaatggtcgaaacggtccttgccagagataagaactggatt
cgttggaagtcggagaactgcccatcaatagagttgcccgcagtatccccagagacattc
gacgaggccaaaaaggcagctcagcgtacaacgacaaagaagcgattgagggccacgccg
atggggtctctaccccttggtttcctggatgatggcgatgacgagcgtgcgatgaagaag
ctcaaggccctggaaagatacagcctgccagagcttgagagcttcaaggggaagattgcc
aacgacgactttgagatcgacatgtcaaacaccccccaggaaaaagcgccttttattgaa
agcaaagcgagtaagagttggcgcgccctccgtatagcaggcaaatcaaggttggcctca
ttcgacaagatcgacgatccggaaaagatcgacgccatatttgaggaaccggtcgatgta
gacgaaagcgaggctgccgaggaagccgtaaaatctgaagacgttcccgaagacaagcgc
ccaatcatactctcaggaccgcccggtgcagggaaagcgacactttttcaattactcgca
agccgacgtcctggagcttttaaatacgtgccacggcatacgacgagaaaggcacaagaa
ggcgaggctgagggcaaagtcttctacttcgtcgagaaacaggcctttaacatgctgaga
gatggcgatgcgttattggagtttaccacgatagatgatgtggactatggcacgagtcgg
aaggctttagaagcggttgtcgagggtggcaaggtcccagtcacctacatggatagcgag
gccatccaacaaactcgcgaccttggctactcggcacggacaattcttatcttgccacca
agtaaggaagttttggaagaacgcttgcgaaaggcggagaaaggcgatttggttgcagac
gcccttagcaaagctgctccctactgggaagaagattcgaagttcaaggatgggtttgat
ttggttctgaccaacgaggagctcgacgccactttcaagacgctggaggaacacatctat
ggcaaagccgaagaggccgagctcagcaatggcaagccagacaacgaggcagcagtagat
gaagcggacactatcatggacgatgctccggtagaggcgccgcaagaaccccaggagtct
caagaagctcagggagttgaagagaccgagaagaccacggaagcacaagagacagaagag
accaaagagaaggtcgacgaggccaaggctgacgaggcaaaggaggcatcctag
DBGET
integrated database retrieval system
