KEGG   Colletotrichum lupini: CLUP02_03447
Entry
CLUP02_03447      CDS       T08561                                 
Name
(RefSeq) WD repeat domain-containing protein
  KO
K14962  COMPASS component SWD2
Organism
clup  Colletotrichum lupini
Pathway
clup03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:clup00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CLUP02_03447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clup03019]
    CLUP02_03447
   03036 Chromosome and associated proteins [BR:clup03036]
    CLUP02_03447
Messenger RNA biogenesis [BR:clup03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CLUP02_03447
Chromosome and associated proteins [BR:clup03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     CLUP02_03447
    COMPASS/SET1 complex (yeast)
     CLUP02_03447
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 73337478
NCBI-ProteinID: XP_049139611
UniProt: A0A9Q8SIG4
LinkDB
Position
2:join(3766494..3766612,3766696..3766919,3766969..3767765)
AA seq 379 aa
MASTAMDLDHRESTPANGNSLNITRSLTTNNTTPLSEVISQDIKDGRPQPHVLSLDFDDP
GELLMTSESDETIQIYSVKEGIHKKNLLSKKYGVKLAKFTHTSSSIIYASTKQNDQIRYL
ATHDNSFIRYFEGHEKSVTDIAIHPGADNFISCSQDNTVRLWNISTKQWCGQLNLNSPYL
TAYDPSGQTFAVACTNSGSVLLYDCRNYDKAPFATFDVVDAGRHVDSQFVVRGWTKLEFS
NDGKHILVGTRGPGHFILDAFDGSLKAYLRKPEGGTRRLAAGETSSTINGSMPKTDQPTI
ESSGDCCFSVDGRYVLSGGPKDVLVWDILTPPQNENKTLDATWVLEEKREAAVLAFNPRY
NFFATADQDVMFWVPDPHA
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggcttcaacggctatggacttggaccatcgcgagtcgactccagctaacggaaattcg
ctcaacattacgcggtctctgacaaccaacaatactacccctttgagcgaagtcatatcg
caagacatcaaggatggccgtccgcaacctcacgtgctgtcactcgacttcgacgaccca
ggcgaacttctcatgacctctgagagcgacgagacgattcagatttacagcgtaaaggaa
ggcatacacaagaagaatttgctaagcaagaagtacggcgtcaagctggcaaagttcacg
catacgagctccagcatcatctacgcgagtacgaagcagaatgatcagatccgatatttg
gctacccacgataattccttcatccgatacttcgagggccacgaaaagagcgtcacagat
attgccatacacccaggcgctgataacttcatctcttgtagccaggacaatactgtgcgc
ctttggaatatttcgacgaagcaatggtgcggtcaactgaacctcaactctccgtatctc
accgcatacgatccgtcggggcagacttttgctgtcgcgtgtacgaacagcggaagcgtt
ctgctatatgactgccgcaactacgacaaggcgccatttgcgaccttcgatgtcgttgat
gccggcagacacgtggactcacagttcgtagtcaggggttggacaaagctggaattttcg
aacgacggcaagcatatactcgtcggcactcgcggccccggccacttcatactcgatgct
ttcgacgggagcttgaaggcgtacctgcgtaagcccgagggcggaacccggcggctggcg
gctggtgagacatcaagcaccatcaatggcagtatgccgaagacggaccagcccacaatc
gagagcagcggtgattgctgcttctctgtggacggtcgttacgttctgagcggtggtcca
aaggatgtcctggtctgggatatcttgacaccgccccagaacgagaacaagaccctcgac
gctacatgggtattggaggaaaagcgagaggcagcggtgttagcattcaacccgcggtac
aacttctttgcgacggcagatcaagatgtgatgttctgggtgcccgatcctcatgcatga

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