Colletotrichum lupini: CLUP02_03514
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Entry
CLUP02_03514 CDS
T08561
Name
(RefSeq) histone-like transcription factor and archaeal histone
KO
K08066
nuclear transcription factor Y, gamma
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clup03000
]
CLUP02_03514
Transcription factors [BR:
clup03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
CLUP02_03514
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GFIT
Motif
Pfam:
Histone
CBFD_NFYB_HMF
CENP-X
Motif
Other DBs
NCBI-GeneID:
73337544
NCBI-ProteinID:
XP_049139677
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All DBs
Position
2:complement(join(4054954..4054983,4055045..4055713,4055777..4055938,4056088..4056144))
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AA seq
305 aa
AA seq
DB search
MPSKAARSLCMIRLMAAIMAQVLRFVSPPCDSQTASTCNAYDPSHEPYLITHTAIGPGFR
SRRTLHRPLGKCAVHQGLTGQYKDILTTYWQQTINHLESDNHDYKLHQLPLARIKKVMKA
DPEVKMISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASALAKSDMFDFL
IDIVPREEASSHAKRTAGQAAPTPQGVPAQANPQMPGQHGSMPQPANHSSSSHPMAATDY
GLAGHALGPDQDYRQNPNMYPGQVQPGPSAPYGQAQQPMYGEIEGMYGYGTMQPQQPPMS
SEEFE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcaaggccgcccgcagcctgtgtatgatacgtctcatggcggccattatggcg
caagtgctgcggttcgtatctcctccttgcgactcgcaaacggcgtctacctgcaacgca
tacgatccatctcatgagccgtatctaatcacgcacacagctatcggcccagggtttcgc
tcccgcagaactttacaccggcccttgggcaaatgtgcggttcatcaaggcttgaccggc
cagtacaaggacatcttgacaacctactggcagcagaccatcaatcatttggaaagcgac
aaccatgactacaagctgcatcaactgcccctggcgcgcatcaagaaagttatgaaggct
gatcccgaagtcaaaatgatatccgccgaagcacccatcctcttcgcaaagggctgcgac
atcttcatcacggaactcacgatgcgggcatggatccacgccgaagagaacaagcggcgc
actttacagcgatctgacattgcatctgccctcgccaaatcggacatgtttgattttctt
attgacatagttcctcgggaggaggcttcttcgcatgccaagagaacagcgggacaggct
gctcccacaccccaaggcgttccagcccaagcaaacccccaaatgccaggccagcatggc
tccatgccacaaccagcaaaccattcgtcctcctcgcatcccatggcggcaactgattac
ggtctcgctggccacgctcttgggcccgatcaggattatcgccaaaacccgaatatgtac
cccggccaagtacagccaggcccctctgccccctatggacaagctcaacaacccatgtat
ggcgagattgagggcatgtatggttatgggactatgcagccacagcagcctcccatgtcc
agcgaggagttcgagtag
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