KEGG   Colletotrichum lupini: CLUP02_03759
Entry
CLUP02_03759      CDS       T08561                                 
Name
(RefSeq) RNA polymerase Rpb6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
clup  Colletotrichum lupini
Pathway
clup03020  RNA polymerase
clup03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CLUP02_03759
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLUP02_03759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clup03021]
    CLUP02_03759
   03400 DNA repair and recombination proteins [BR:clup03400]
    CLUP02_03759
Transcription machinery [BR:clup03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CLUP02_03759
  RNA polymerase III system
   RNA polymerase III
     CLUP02_03759
  RNA polymerase I system
   RNA polymerase I
     CLUP02_03759
DNA repair and recombination proteins [BR:clup03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CLUP02_03759
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 73337786
NCBI-ProteinID: XP_049139919
UniProt: A0A9Q8SJ06
LinkDB
Position
2:complement(join(4778434..4778470,4778577..4779056,4779108..4779142))
AA seq 183 aa
MSDFGDDDVGGGDETMYEDEAADYWDPEVPADDEEVGRAEGDEEDADNVVASGDPSAAAN
AGKGNEKSHRDKKIPDDQRTTTPYMTKYERARILGTRALQIRFVKPQSHPKQIPRDKVAM
HADRNKLMRGISMNAPVLVDLEGETDPLQIAIKELREKKIPLIVRRYMPDGYYEDWTCEE
LLQ
NT seq 552 nt   +upstreamnt  +downstreamnt
atgtctgactttggcgatgacgatgttggcggaggcgacgagaccatgtacgaggacgag
gccgccgactactgggatcccgaggttcctgcggacgatgaggaagtcggaagggcagag
ggcgacgaggaggacgcggacaatgtcgttgcatcgggcgacccctctgcggcagcgaac
gcgggcaagggcaacgagaagtcgcaccgcgacaagaagattcccgatgaccagcgtacg
acgaccccctacatgacaaagtacgagcgcgcccgtattctgggaacccgcgccctgcag
atcaggttcgtcaaaccgcaatcccacccaaagcaaataccccgcgataaagtcgcgatg
cacgcggacagaaacaagctaatgcgtgggattagtatgaatgcgccggtgctggtggac
ttggaaggagagacggatcctcttcaaatcgcgatcaaggagctccgagagaagaagatc
cctctcattgtgcgccgctacatgcccgacggatactacgaggattggacctgcgaggag
cttctccagtga

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