Colletotrichum lupini: CLUP02_03892
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Entry
CLUP02_03892 CDS
T08561
Name
(RefSeq) DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
clup
Colletotrichum lupini
Pathway
clup03440
Homologous recombination
clup03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLUP02_03892
03460 Fanconi anemia pathway
CLUP02_03892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clup03032
]
CLUP02_03892
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_03892
Enzymes [BR:
clup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CLUP02_03892
DNA replication proteins [BR:
clup03032
]
Eukaryotic type
DNA Topoisomerases
CLUP02_03892
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
CLUP02_03892
FA (Fanconi anemia) pathway
CLUP02_03892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
73337919
NCBI-ProteinID:
XP_049140052
UniProt:
A0A9Q8SK71
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All DBs
Position
2:complement(join(5206626..5208067,5208126..5208307,5208363..5208541,5208598..5208795,5208851..5208931))
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AA seq
693 aa
AA seq
DB search
MKVLCVAEKPSISKAVAGHLAGRSPEVHNTRSQYIKNYGFDFDFGAPWGSCGVTMTAVLG
HLTGLEFTPENKNWSHPPPESLFSAPVVTVVPQDKKTVAENIERQARYCQLLVIWTDCDR
EGEHIGKEIVNAAKKGNSRITVKRATFSNIERAHILTAARRLTDLDQKQVDAVDARIELD
LRIGYAFTRFLTISLRPLGGALQERTISYGKLARFVVDRYFRVQNFVPEPFWSIKVMHSR
EGKKVNFSWSRNRLFDRMSVVILYERCLNAKKARVTKVQEKPTRKWKPLPLTTVELQKAA
TRLLRMSGQQAMTVAEGLYNKGFISYPRTETDRFDKGMDLKALCRKQTPDSRWGQYAQSL
LDGSFSQPREGKHDDKAHPPIHPVTYAAPTVLSADEKQLYEYVVRRFLACCSEDAKGLAT
DVEILYGEETFHTRGLVVLERNYLDVFVYEKWNDSAELPKFTPDETFQPTEALMTDGKTS
PPNYLTEADLIALMDANGIGTDATMAEHIQKIQDREYVQLADGGQRGQDGDDDDDDRDRP
PSPPARGGRGGRGNRGGRGGRGGRGASSAGRRGLKVFIPTQLGVALITGFDRMEFETSLG
KPFLRKEMENKMKAICDGRMTKEAVLRESLGQYRQVFRDSQERLNVLKAVSRSSITNTLT
RADFIRRVANTCRFASEPGNSMFVMANKGSALS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcctctgcgttgccgagaaaccatccatttcgaaagccgttgccggccatttg
gcaggacgaagccctgaagtccacaacactcgttctcaatacatcaaaaactatggcttc
gactttgactttggcgccccgtggggttcgtgtggtgttaccatgacggccgttctgggc
catcttacgggactcgagttcacaccagagaacaagaactggtcgcacccgccgccagag
agcttgttcagtgcaccagtagtaacagtagtgcctcaggacaagaaaaccgttgcggag
aacattgagcggcaagctcggtactgccagcttcttgtcatctggactgattgtgatcga
gagggagagcacattggaaaagaaatcgtcaatgctgccaagaaaggcaacagccgaatc
accgtcaagcgtgccactttcagcaacatcgaacgagcccacattctcactgctgcccga
cgcctcacagaccttgatcagaaacaagtcgacgccgtagatgcgagaatagagctggat
cttaggattgggtatgcttttacgcgtttcctgaccattagccttcgccccctgggaggt
gcgctgcaggaacgaacaatcagttatggtaagcttgcacgattcgtcgtagatcggtac
ttccgggtccaaaactttgtccccgagccgttctggagcatcaaagtcatgcactctcgt
gagggcaagaaagtcaacttcagctggtcgcgaaaccgtctctttgatcggatgtctgtt
gtcattctctacgaacgatgcctcaacgcgaagaaagccagggttacaaaggtccaggag
aagccaacgaggaaatggaagcctctgccgttgaccactgtcgagctgcaaaaggcagca
actcgtcttctccggatgagcggtcaacaggccatgacagtcgccgagggtctctacaac
aaagggtttatcagctatcctagaactgaaacagatcgtttcgacaaaggcatggacctc
aaggcactatgcaggaagcagacgcctgattctcgatggggccaatacgcgcagagtctt
ttggatgggagcttcagtcagccacgggagggaaaacatgatgataaggcccatccaccc
attcatccagtcacgtacgcggcgcctacggtactgagtgcagatgagaagcagctttac
gaatatgtcgtacggcggttccttgcttgttgctccgaagatgccaaaggcctggcaacc
gacgtggagatactctatggtgaagagaccttccatacccgtggattagtcgtcctagag
cgcaactaccttgacgtctttgtctacgagaagtggaacgactctgcagaattaccgaaa
ttcacgccagacgaaacattccagccaacagaagccttgatgacggatggcaagacaagc
ccgccaaactacctcacagaagcagacctcattgcgctcatggatgccaacggaatcgga
acagatgctacgatggcggagcacattcagaagatccaagacagagaatacgtccagcta
gctgacgggggtcaacgtggccaggatggtgacgacgatgatgacgaccgggatagacct
ccttcgccgccagctagaggcggccgagggggccgcggcaatcgcggtggtcgcgggggc
agagggggtcgcggcgcgtcgtcggcaggacggagagggctcaaggtcttcatcccgacc
cagctcggtgtggcactcatcacgggattcgatcgcatggaattcgaaactagtctgggc
aagccattcttgcggaaagagatggagaacaagatgaaggcaatctgcgacgggcgcatg
accaaggaggcagtcctgcgggaaagtctaggccagtaccgacaagtattccgggactcg
caagaacggctcaacgttctcaaggcagtaagtcggagttccatcactaacacgcttaca
cgcgctgactttattaggcgtgtcgcgaatacatgtcgattcgcgagtgagcccggcaat
tcgatgttcgtgatggcaaataagggctcagccctttcgtag
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