Colletotrichum lupini: CLUP02_03899
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Entry
CLUP02_03899 CDS
T08561
Name
(RefSeq) Ku70/Ku80 N-terminal alpha/beta domain-containing protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
clup
Colletotrichum lupini
Pathway
clup03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CLUP02_03899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_03899
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
CLUP02_03899
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
VWA
Motif
Other DBs
NCBI-GeneID:
73337926
NCBI-ProteinID:
XP_049140059
UniProt:
A0A9Q8SL39
LinkDB
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Position
2:join(5223567..5224054,5224104..5224164,5224218..5224760,5224841..5225235,5225294..5225505,5225585..5226063,5226132..5226149)
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AA seq
731 aa
AA seq
DB search
MADKEASVYIVDLGSSMADCHNGRTESDLDWSMRYVWDKISTTVAASRKTWTVGVIGLKT
DETQNAMGEEEGYGNISVLQELGPMTMTSLRELTDAVKPSETETGDAVSAVVLAVDMIET
FTKKLKYKRRIYLITDGTSVIDGDDVDSIAKKINHDGIELIVLGVDFDDAEFGFKEEDKP
SIKKKNEEILKDFVSKCDNAQFATIAEAIDELDTPRLKPVKPYKTYDGPLTLGLADPPED
LKIPPTPAVINVERYFKTKQAKAPTASTVVVSAEPGPSQQLEGGDPMEGVESTSAGFAAV
KSARAYKINDPDAPGGKRDVEFESLAKGYQYGRTAVAISESEWNVTKLETVKTFSIIGFI
PCEKYEPFLNMGETCVTVARKFDEKSQLALSSLIHALYELESYAVARLVVKEKKDPVLVL
LAPRIEPDMECLYDVPLPFAEDVRGYQFPPLDKVITVSGQKITTNHRLLPGDELTDAMSD
YVDSMDLGTFGTDDDGNPSEYAAIDDTYNPIIHRINQAIRQRAVNPEGQIDPIPPILVRY
AAPPEELVEKSKSQIDGLISAAQVKKVPPKAKGKRKFEAAKPLSGLDVDALLGTTSKSAL
KSPKITPENAIPDLKRALATAEDESEIRDAAKQMAAVVAQLVTDSFGDNNYARASENLSV
LRRGLVELEEPGVYNDLIRDLKKKMLSGELGGDRREMWWRVRTSRLGLIDQGTSEVSNVK
SEEADEFLKSK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaggcatcagtctacattgtcgacctcgggtcctccatggccgattgc
cacaacggccgcaccgaatctgacctggactggagcatgcggtacgtatgggacaagatc
tcaaccacagtcgccgcctcgcggaaaacatggaccgtcggcgtcatcggtctcaagacg
gatgagacccagaacgccatgggggaagaagagggatacggcaacatctccgtcttgcag
gagctcggcccaatgactatgacttctctgagggaactcacggatgcggtgaagccgagc
gagacggagacgggtgatgctgtctcggcggtggtcctcgccgtcgatatgattgagacg
tttaccaagaagctcaagtataagcggcgcatctacctcatcaccgacggcacgtctgtg
attgacggcgacgatgtcgattcgattgcaaaaaagatcaatcacgacggaattgagctg
atagtactgggcgtggactttgacgatgcagagttcggctttaaggaagaggacaagccg
tcaatcaagaaaaagaatgaagaaattctcaaggattttgtctccaaatgcgacaatgcc
caatttgcaacgattgcagaggccattgacgagctcgacacgccgcgcctcaaacccgtc
aagccctacaagacatacgacggacccctaaccctcggtctggctgaccctccagaggac
ctcaagattccacccacgcccgcagtcatcaacgtcgagcgctacttcaagaccaagcaa
gccaaggccccaaccgcctccaccgtcgtagtatcggccgaacctggcccctcgcagcaa
cttgaaggcggcgaccccatggagggtgtcgagtcgacgtcggctggcttcgcggcggtc
aagtcggcgcgggcgtacaagatcaatgacccggacgcaccgggcggcaagcgtgacgtt
gagttcgagtccctcgccaaagggtaccagtacggccgcacggcggtcgcgatcagcgag
tccgagtggaacgtcaccaagctcgaaacggtcaagacgttcagcatcattggcttcatt
ccctgcgaaaagtacgagccgtttctcaacatgggcgagacgtgcgtgacggtcgcccgc
aagtttgacgaaaagtcgcagctcgccctgtcctccctcatccacgccctctacgagctc
gagtcctacgccgtcgcccgacttgtagtcaaggagaagaaggaccccgtcctcgttctc
ctagccccgcgcatcgagccggacatggagtgcctctatgacgtacccctcccctttgcg
gaggatgttcgggggtaccagttcccgccactcgataaggtcatcaccgtcagcgggcag
aagatcacgacaaatcaccgcttgctgcccggcgatgagctcacagatgccatgagcgac
tacgtcgattctatggatctgggtacttttggtactgatgacgatggaaacccgtcagag
tatgctgccatagacgacacgtacaacccaattatccacagaatcaaccaagccatccgc
caaagggcagtcaacccggaaggccagattgacccaattcctcccattctagtgcgctac
gccgcgcctccagaagaactagtcgagaaatcaaaatcccaaatcgacggtctcatctca
gcagcacaagtgaagaaagttccccccaaagcaaagggaaaacgcaaattcgaagccgca
aaacccctctcaggcctagacgtcgacgccctcctaggaacgacgtccaaatccgcctta
aaaagccccaaaattacccccgaaaacgccattccggacctcaagcgcgccctcgccacc
gcggaagacgagtccgagatccgcgacgccgcaaagcagatggccgccgtcgtcgcgcag
ctcgtgacggacagcttcggcgacaacaactacgcacgcgcgtccgagaacctgagcgtc
ctccgccgcgggctcgtcgagctcgaggagccgggcgtgtataatgacttaatcagggac
ctgaagaagaagatgctctcgggcgagctgggcggggatcggagggagatgtggtggcgg
gtgaggacgtcgagattggggttgattgatcaggggacgtcggaggtttcgaatgtcaag
agcgaagaggctgatgagtttctaaagtcaaaatga
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