Colletotrichum lupini: CLUP02_04361
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Entry
CLUP02_04361 CDS
T08561
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clup03016
]
CLUP02_04361
Enzymes [BR:
clup01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CLUP02_04361
Transfer RNA biogenesis [BR:
clup03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLUP02_04361
Prokaryotic type
CLUP02_04361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
73338384
NCBI-ProteinID:
XP_049140517
UniProt:
A0A9Q8SK60
LinkDB
All DBs
Position
2:complement(join(6684121..6684295,6684349..6685770,6685846..6686087))
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AA seq
612 aa
AA seq
DB search
MATDDAPQPAGGAPARQPADLPTGDKPSISSESRADGSAQPGAAVEKSQEGRRGDRRDDN
RRGGKSRGPKRKHDVGRSAWSREATDKRGRNAEYQEFKRRKVDKDGNPETTENPFTAEEI
AAEGRKPKRKVAVMVGYSGTGYKGMQINNEEKTIEGDLFKAFVAAGAISKANADDHKKSS
LVRCARTDKGVHAAGNVISLKLIIEDEDIVEKINAALPDQIRVWGIQRTNNSFSCYQTCD
SRWYEYLMPTYCLLPPHPDSWLWKQLVEAAKEKGYYEEFSKKLADVEGYWRKVDEEDIKP
ILDKLDPETMAKVMERIHADEDATAQADEAKSAPETKTEETPAEPATIEENKAHAEVPEG
SVKPRNRDLTPLDFALRDIKAAYIAAKRRYRVTPERLAQLQEALNMYCGTINFHNYTVQK
SFKDPSAKRHIKSFKVNMQPIQIRDTEWVSTKVHGQSFMMHQIRKMVGMASLVVRCATPL
ERIKESYGPTRIAIPKAPGLGLLLERPVFDAYNKRAADNFGKETIDFTKYDEKLQAFKDK
QIYQRIFEVEEQENTFHIFFQQVDNFKSDYFLWLTAGGIEAGGVRTGKEEKGSKTLESAL
GDEDENPVNGDG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgacgatgctcctcaaccggccggcggtgctcccgcgaggcaacctgccgac
ctcccgactggcgacaagccgtcaatttcatcagagtcccgcgcagatggctcagcccag
cccggtgctgcagtggaaaaatcacaggagggccgacgcggcgacaggcgcgacgacaac
aggcgaggcggcaagtcgcgcggaccgaagcggaagcacgacgtcggccggtcggcgtgg
agccgtgaggccaccgacaagcgcggacgcaatgccgagtaccaagaattcaagcgcaga
aaggtagacaaggacggcaaccctgagaccaccgaaaaccctttcaccgccgaagagatc
gccgccgagggtcgcaagccgaagcgaaaggtggccgtcatggtcggatactcaggcacg
ggctacaagggcatgcagattaacaatgaggaaaagacaatcgagggagacttgttcaaa
gcctttgttgctgctggagccatctcaaaggccaatgccgatgaccacaagaagtcgagt
ctcgtccgatgcgcgagaaccgacaaaggcgtccacgctgctggcaacgtcatcagcttg
aagctcattatcgaagacgaggacattgtcgagaaaatcaacgctgctctccccgaccag
atccgtgtctggggtatccagcgtaccaacaactccttcagctgctaccaaacctgcgac
tcgagatggtacgagtacctcatgccgacatactgcctactgccccctcatcccgacagc
tggctgtggaagcagctggttgaggccgcgaaggagaagggctactacgaggagttctca
aagaagctggccgatgtcgagggatactggagaaaggttgacgaggaggacatcaagccg
atcctcgacaagctcgatcccgagaccatggccaaggtgatggagcgaatccacgccgac
gaggatgcgaccgcacaggcagacgaggccaagtccgcccccgagacgaagactgaggag
acaccagccgagcccgccaccatcgaggagaacaaggcccacgcagaggtccccgaagga
agcgtcaagcccagaaaccgcgacctcaccccccttgactttgccctgcgcgacatcaag
gccgcttacattgcagccaagagacgttaccgtgttacccccgagcgcctcgctcagctt
caggaggccctcaacatgtactgcggcacaatcaacttccacaactacaccgtccagaag
agcttcaaggacccgtcagccaagcgccacatcaagtccttcaaggtcaacatgcagccg
attcagattcgcgacaccgagtgggtctccaccaaggtccacggacaaagtttcatgatg
caccagatccgcaagatggtcggcatggcttccctcgtcgtccgttgcgccaccccactg
gagcgcatcaaggagagttacggtcccacgaggatcgcgattcccaaggctcctggtctg
ggtcttcttttggagcgacccgtgttcgatgcctacaacaagcgggcggcagataacttt
ggcaaggagacgatcgactttacgaagtatgatgagaaattgcaggccttcaaggataag
cagatctaccagcgcatctttgaggttgaagagcaggagaacaccttccacatcttcttc
cagcaggtagataacttcaagtccgactatttcctgtggctcacggctggcggcatcgag
gctggtggggttcgaaccggaaaggaagagaagggaagcaagaccctcgagtcggcgctt
ggtgacgaagacgagaaccctgtcaacggtgacggttaa
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