Colletotrichum lupini: CLUP02_04672
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Entry
CLUP02_04672 CDS
T08561
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase ssp-1
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
clup
Colletotrichum lupini
Pathway
clup03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CLUP02_04672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_04672
03110 Chaperones and folding catalysts [BR:
clup03110
]
CLUP02_04672
Enzymes [BR:
clup01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
CLUP02_04672
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CLUP02_04672
Chaperones and folding catalysts [BR:
clup03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
CLUP02_04672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
WW
Rotamase_2
WW_1
Motif
Other DBs
NCBI-GeneID:
73338693
NCBI-ProteinID:
XP_049140826
UniProt:
A0A9Q8WCZ3
LinkDB
All DBs
Position
2:complement(join(7739463..7739472,7739548..7739804,7739876..7740142,7740386..7740388))
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AA seq
178 aa
AA seq
DB search
MADTGLPPGWEVRHSNSKNLPYYFNAAEKVSRWEPPAGTDTEKLKHYMATHHSAGAGARS
QAVPVPEGKIRAAHLLVKHKDSRRPSSWREAEISRTKEDALEIIKAHEAKIMSGSTTLGE
LALTESDCSSARKRGDLGYFGKGDMQREFEEAAFGLNPGDISGVVETASGLHLIERLE
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccggtctcccccccggctgggaagtgcgacactccaactccaagaacctg
ccctactacttcaatgccgccgaaaaggtctcacgctgggagccgcctgcgggaaccgac
accgagaagctgaagcactacatggccacccatcacagcgctggcgccggcgcaagatcc
caggctgttcctgtgccagagggaaagatccgcgctgcccacctgctggtcaagcacaaa
gacagccggcgcccttccagctggagagaggccgaaatttcccgcaccaaggaggacgca
ctcgagatcatcaaggctcacgaggccaagatcatgtctggttccaccacgctcggcgag
ctggccctgaccgagtccgactgcagcagtgcccgtaagaggggtgacttgggctacttc
ggcaagggtgacatgcaacgggagtttgaagaagctgcctttggtcttaaccccggcgac
atcagcggcgtcgtggagacggcgagcggcctgcacttgattgagagactggagtaa
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