Colletotrichum lupini: CLUP02_05264
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Entry
CLUP02_05264 CDS
T08561
Name
(RefSeq) SNF2 super family protein
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clup03036
]
CLUP02_05264
Chromosome and associated proteins [BR:
clup03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
CLUP02_05264
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ERCC3_RAD25_C
UBA
P-loop_SecA
HBS1_N
UBA_RAD5A
HDA2-3
CUE
PWI_ABCF3
Motif
Other DBs
NCBI-GeneID:
73339282
NCBI-ProteinID:
XP_049141415
UniProt:
A0A9Q8SLW6
LinkDB
All DBs
Position
3:1769791..1772898
Genome browser
AA seq
1035 aa
AA seq
DB search
MVINYTLSSSPPPVGSSAMGTSPIRGLRRGNDADELADETIPESPYQTQATQIVNRTSLA
SQAKTQPDHSSSPSSRSVIEVPASSPFQNKSSYFSRLVPPGSRFQPPPKSQAPSNPRKRP
SAEPVLIQGSSDDEDDRTSRGNISQTSFKKHVANFEYVSVDKLQKKIEEVSEALNGTIPV
QYYKEALTACHNNVEDAINYLLDGRHLKPKVNSFVSSTKPSITVGDERTKNMDRKSGRPG
SPSKPKLLGRHAPTLPTPSRSTTPSPPKPKRRRLMQGRRPGRSPPASQQAHEDEPSLDEL
AADKVDEPIIIPDDNEDEDFDNEDELNEAVKDSLQDKALQAINTSSIADLSAMTNIKMDE
LKIIETKRPFDTISEVQAVSVAKKANARSRRPKVPIGETLVDAIMEFTRSVNAIDEVVAE
CEKKANKVKQEISRWDLDVKGQKRSTQSSSTNSDLPLTPTSFHTQKLSEPPISCQPKFMD
GHCTMRPFQLFGLNWMSLLYNSGYGCILADEMGLGKTCQVISLICHLVENYEKTGKGERP
WPNLVVVPPSTFSNWMGEFQRFAPDLSILAYQGPQAERREIAYEMLENPSDYHVVLTTYT
QVGSEEDLEALRELQPAAAIFDEGHKMKNPKTKIYKDLIRIKAGWRMLLTGTPVQNNLME
MLALLNFIDPLQFNGRMDQLQYMFSQKVTIRDVNNGAFLYGERVSRARTILEPFILQRRK
QQVLSDMPAKICNVAYCDLAPGVQKELYEDYERLFKAGPVKKTTTGRQSDQNNSWMQLRK
AALHPQLFRRYFDNKKVEKMANILMREVPQSELQQPRIDHLIGELQNSSDFELHLWCRDY
ACIRHLDVPEGSWMDSGKVVKLLELIHQYRDNGDRVLVFSKFAKVIEILREVLHTDNIRH
CVLYGQTNVAERQDLIDEFNNDTDITAFLLTTGAGGTGINLTSANKIIIFDQSDNPQDDI
QAENRAHRLGQTRDVEVIRLLTSHTIEELIYKACQKKIELAEKVTGAVEDLDDKNAEENL
EKEVRKMMADQLTPS
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggtaatcaactataccctcagctcctcaccgccgccggtgggcagctcggcaatgggc
acgtcaccgatcagaggccttcgtcgcggtaacgacgccgacgagctcgccgacgagacg
atccccgaatccccctaccagacacaagcgacgcaaattgtcaatcgaacgtcactcgcg
tcccaagccaagacgcaacccgatcattcctcctccccctcttcgcgttcagtcattgag
gttcccgcatcctctccgttccagaacaaatccagctacttctcacgcctcgtgcccccc
ggctcacgatttcagccgccccccaagtcacaagcgccttccaacccgcggaagaggccc
tcggcggagcctgtgctcatacaaggctcgtcagatgacgaagatgatcgaacgtcccgt
ggcaatatcagccagacatctttcaagaagcatgtcgccaactttgagtacgtttcggtg
gataagctgcaaaagaagattgaagaggtttctgaggcgctcaacggcacgataccggtt
caatactataaggaagctttgaccgcatgccacaataatgttgaggacgcaatcaactac
ttgttggatggtcggcatctgaagcccaaagtcaacagcttcgtgagctctaccaagcca
agcataaccgttggcgacgaaagaacaaagaacatggaccgcaagtcaggcagacccggc
tcacccagcaagccaaaactactcgggcgacatgccccgactctaccaacaccttctcga
agcaccaccccctcaccaccaaagcccaagcgcaggcgcttgatgcaaggtcgtcgcccc
ggtagatctccacctgcgtcccagcaggctcacgaagacgagccgtccctagacgagctt
gccgccgacaaagtggacgagcctatcatcattcctgatgacaatgaagacgaggatttt
gataacgaggatgaattgaacgaggcggtcaaggacagcctgcaggacaaggctctccaa
gccatcaacaccagctcgatcgcggatctgtcagccatgacgaatatcaagatggacgag
ctgaagattattgagacgaagaggcctttcgataccattagcgaggtacaagccgtttcg
gtggccaagaaggcaaacgctcgcagcaggaggcctaaggttccaattggagagaccctg
gtcgatgcaatcatggaattcactcgcagcgtcaatgccattgacgaagtggtagccgaa
tgcgagaagaaggcgaacaaggtcaagcaggagatcagccgatgggacctcgatgttaag
ggtcagaaacggagcacacagagctcctccactaacagcgatctccccctgacaccgaca
agcttccacactcaaaagctttcggagccgccaatctcctgccagccgaagttcatggat
gggcactgcactatgcgtccctttcagctgttcggtctcaactggatgtccctcctgtac
aacagtggctacggatgcattctagccgatgagatggggctaggcaaaacttgccaggtc
atttctctcatctgtcatcttgtcgaaaactacgagaaaaccggaaagggtgagaggccg
tggcccaatcttgtggttgtaccaccgtcgacgttctcaaactggatgggagagttccag
cgctttgctcccgacctctcgattcttgcatatcaaggtcctcaagccgaacgtagagag
atagcatacgagatgctcgagaacccgtcggactaccacgtcgtcttgacgacctatacc
caagtcggctccgaggaggacctggaggctctccgagagttgcagccagccgcagccatc
tttgacgaggggcacaagatgaagaaccccaagaccaagatttacaaggacttgatcagg
atcaaggccggttggagaatgcttctcaccggaacacctgttcagaacaacttgatggaa
atgctggcgttgttgaacttcattgacccactccagttcaacggtcggatggaccagctc
cagtacatgttcagccaaaaggtcaccattcgcgatgtcaacaatggtgctttcctctac
ggcgagcgtgtcagccgagccagaacgattctggagccgttcatcctgcagcgtcgcaag
cagcaggtgctctctgacatgccggccaagatttgcaatgtcgcatactgcgatctggca
ccaggagtacagaaggaactgtacgaggactacgagcgacttttcaaggctggcccggtc
aagaagacgacaaccgggcgtcagagcgaccaaaacaacagctggatgcagcttcggaag
gcggctcttcacccgcaactattccgtcgttactttgacaacaagaaggttgagaagatg
gcgaatattttaatgcgagaggttccgcaatccgagctgcaacaaccgcggattgaccat
ctcattggggagctgcaaaattcttccgatttcgagctgcatctctggtgccgtgattac
gcttgtatcaggcatcttgacgtccctgagggttcttggatggacagtggcaaggtcgtc
aagctactagagctcatccaccagtatcgcgacaacggcgaccgcgtcctcgtcttcagc
aaatttgcaaaggtcattgagatcctacgggaggtccttcacaccgataacatcaggcac
tgcgtcttatatggccagaccaacgtcgccgagcgccaggatctgattgacgagttcaac
aacgatacagatatcacagcctttttgctcacgacgggcgctggtggcactggcatcaac
ctgacctctgccaataagatcatcatctttgatcaatccgacaacccgcaggacgacatt
caggccgagaaccgagctcaccgcctcggccagacgcgggatgtggaggtgattcgcttg
ctgacatcgcacaccattgaggagctcatctataaagcctgccagaagaagattgagctc
gccgagaaggtcactggtgcggtggaggatttggacgacaagaatgccgaggagaacttg
gagaaggaggttcgaaagatgatggcggatcagttgactccttcatga
DBGET
integrated database retrieval system
