KEGG   Colletotrichum lupini: CLUP02_05305
Entry
CLUP02_05305      CDS       T08561                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
clup  Colletotrichum lupini
Pathway
clup03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CLUP02_05305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clup03041]
    CLUP02_05305
   03036 Chromosome and associated proteins [BR:clup03036]
    CLUP02_05305
Spliceosome [BR:clup03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CLUP02_05305
 Complex B
    CLUP02_05305
 Complex C
   U2 SnRNP specific factors
    CLUP02_05305
Chromosome and associated proteins [BR:clup03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    CLUP02_05305
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT HEAT_EZ TOR1L1_N HEAT_EF3_N HEAT_2 Htt_N-HEAT_1 UTP20 mTOR_dom XMAP215_CLASP_TOG Adaptin_N UNC45-central
Other DBs
NCBI-GeneID: 73339323
NCBI-ProteinID: XP_049141456
UniProt: A0A9Q8SMW3
LinkDB
Position
3:1879884..1883534
AA seq 1216 aa
MSDADFETVRKLQAERNAAAAAKKGSTTFDPNNQRADAGTKQKLTDSFDTDLYDRNGVDK
FAGYNTSIPAGDDDDDEMEGTDNTRRLVGQYTASREMIDEFARGDGVEEDDPLAGRGEKS
NRITDRETDYQKRRFDRGLSPSRTDAFANGDNKNGDSYREIMQRRELEREEERVAREIQA
KAARGPEEDGNIAPATLRDDDKENAEAGSTDAVSSGRKRKKRWDVATTTADEEAAQPSEP
AKSKRSRWDQAPSLEPADAPKKRSRWDQAPSATPMGNQGLATPMHPSQAGSAALPTTFGT
DISGRNAPISDEELDALLPGEEQGYKILEPPPGYAPIRAPAHKLMATPAPQTGFMMQDPD
AVRLSGKPVPAEIPGIGDLQFFKAEDMAYFGKLTDGSDENSLSVDEMKERKIMRLLLKVK
NGTPPMRKTALRQLTDNARQFGAGPLFDQILPLLMEKTLEDQERHLLVKVIDRILYKLDD
LVRPYVHKILVVIEPLLIDQDYYARVEGREIISNLSKAAGLATMISTMRPDIDHVDEYVR
NTTARAFAVVASALGIPALLPFLRAVCRSKKSWQARHTGVKIVQQIPILMGCAVLPHLKG
LVDCIGPNLNDEQTKVRTVTSLAIAALAEASNPYGIESFDDILNPLWTGARKQRGKGLAG
FLKAVGFIIPLMDEEYANYYTSQIMEILLREFSSPDEEMKKVVLKVVSQCAGTDGVTAGY
LKEHVLDEFFKSFWVRRMALDKRNYRQVVETTVDIGQKVGVSEILERIVVNLKDESEAYR
KMTVETVEKIVASLGAADIGERLEERLIDGILHSFQEQSVEDIVMLNGFGSVVNALGSRC
KPYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMKQCGEDALMGKLGIVLYEYLGEE
YPEVLGSILGALRSIVTVVGITQMQPPIKDLLPRLTPILRNRHEKVQENTIDLVGRIADR
GPESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQDVLATLLNNLRVQE
RQSRVNTAVAIGIVAETCAPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMAKDY
VYAVTPLLEDALIDRDQVHRQTAASVVKHIALGVVGLGCEDAMVHLLNLLYPNLFETSPH
VIDRIIEAIEAIRMAVGPGVVLNYVWAGLFHPARKVRQPYWRLYNDAYVQGADAMVPYYP
NLDEEKVDRSELAIML
NT seq 3651 nt   +upstreamnt  +downstreamnt
atgtccgacgcagacttcgagactgtccggaagctccaggcggagcgcaacgctgccgcc
gctgcgaagaagggttcgaccactttcgacccgaacaatcaacgtgccgacgctggcacc
aagcagaaactcaccgatagcttcgacaccgatctgtacgatcgaaatggcgtcgacaag
tttgccggatacaacacgtccatcccggccggcgatgacgatgacgacgagatggaaggc
accgacaacacgcgccgtctcgtcggccagtacacggcatcgcgtgaaatgattgacgag
tttgcacgcggcgatggcgtcgaagaggatgaccccttggctggccggggcgagaagagc
aacaggattaccgatcgcgagacagactaccagaagcgccgattcgatcgcggtctctcc
ccttcccgaaccgatgccttcgccaacggagacaacaaaaacggcgatagctaccgcgag
atcatgcagcggagagagcttgaaagagaggaggaacgcgttgcaagggagatccaggcc
aaggccgcgaggggtcccgaggaagacggcaacatcgccccagcgactctgagagacgac
gataaggaaaacgcggaagctggctctaccgatgctgtctcttctggaaggaagcgcaag
aaaaggtgggatgtcgcgaccacgacagctgacgaggaagctgctcagccatctgagccc
gccaagtcgaagcgctcgcgttgggaccaggccccctctctggagcctgcagatgcacca
aagaaacggtcaaggtgggatcaggccccttcggccactccaatgggtaaccagggtctc
gccacgccaatgcacccgtcacaggcgggaagcgcagccttgcctacgactttcggtacc
gatatctcaggacgcaacgcgcccatcagtgacgaagagttggacgcgcttctccccggc
gaggaacagggatacaagattctcgagccaccgccaggatacgctcccattcgcgcgcct
gctcataagctcatggctaccccagcaccgcagactgggttcatgatgcaggaccctgac
gccgttagattgagcggaaagcctgtgccggcagaaattcccggcattggtgacctgcag
ttcttcaaggccgaggatatggcgtacttcggtaagctgaccgatggttctgacgagaac
agcttgagcgtggacgaaatgaaggagaggaagatcatgaggctgctcttgaaagtcaag
aatggtactccaccaatgcgtaaaactgctctgagacagctcaccgacaatgccaggcag
tttggagccggtccgctcttcgaccagattcttcccctgctcatggagaagactttggaa
gaccaggagcgtcatttgcttgtcaaggtcatcgatcgtattctctacaagctcgatgac
ttggtgcggccatatgtgcacaagattttggtcgttatcgagccgctgctcatcgatcaa
gactactacgccagagtcgaaggtcgtgagatcatttccaacctcagtaaagcggctggt
ctggccaccatgatcagcacgatgagaccagatatcgaccatgtcgacgagtacgtgcga
aacaccaccgcaagagctttcgccgttgtggcgtccgccctcggtattccggccctgctg
cctttccttcgggcagtgtgtcgcagcaagaagtcatggcaagcccgccatactggtgtc
aagattgtgcagcaaattcctatcctaatgggctgcgccgtccttccgcacctcaagggc
ttggtcgactgcatcgggcccaacctgaacgacgagcagaccaaggtcaggacagtcacc
agcttggctattgccgcgcttgccgaagcttcaaacccctacggtattgagagcttcgac
gatatcctcaacccgctgtggactggagctcgcaagcaaagaggcaagggtttggctggt
ttcctcaaggccgtcggtttcatcatcccgctcatggatgaggaatatgccaactactac
accagtcagattatggagattctccttcgcgagttttcttccccagacgaggagatgaag
aaggttgtcctgaaggttgtgtctcagtgcgctggtactgatggtgttaccgcaggctac
cttaaggagcatgtcctggacgagtttttcaagagcttctgggtgaggagaatggctttg
gacaagcgcaactacagacaggttgtcgaaaccaccgtcgatattggccaaaaggtcggc
gtcagcgaaatcctggaacgaatcgtagtgaacctcaaggacgagagtgaggcctacagg
aaaatgactgtcgagacagtggagaagattgtcgctagtttgggcgcagcagacatcggc
gagcgtcttgaggagcgcttgatcgatggtatcctacactcgttccaggaacagagcgtg
gaagacattgtcatgctcaacggtttcggctccgtcgtcaacgccctgggatcgcgctgc
aagccatacctgccccagatcgtcagtaccatcctctggcgattgaacaacaagtcagca
acagtacggcagcaagcagccgacctcatctcacgcattgctatggtcatgaagcaatgc
ggagaggacgctttgatgggcaagttgggcatcgtcctttatgaatacctgggtgaggag
taccccgaggttcttggttccatcttgggagctctgaggtccatcgtcacggttgtcggt
attacacagatgcaacctcctatcaaggacttgctgccaagactcacccctatcctgcgt
aaccgacacgaaaaggtccaagaaaacaccatcgacctggtcggtcgtatcgccgatcgc
ggccccgagagtgtgaacgcccgcgagtggatgcgtatctgcttcgagctcctcgacatg
ctgaaggcacacaagaagggcatccgtcgtgccgccaacaacacttttggtttcatcgct
aaggccatcggtccccaggatgtgctcgccacgctgctgaacaatcttcgcgtgcaggag
cgtcagtcccgtgtcaacacagctgttgccattggtatcgttgccgagacttgcgccccc
ttcactgttcttcccgccctcatgaacgagtaccgcgttcccgagctcaacgtacaaaac
ggtgtgctcaaatccctctctttcctatttgagtacattggcgagatggccaaggactac
gtctatgctgtcacccctctgctcgaggatgctctcatcgaccgcgaccaagtccatcga
cagacggccgcatctgtcgtcaagcatatcgcgcttggcgttgtcggccttggatgcgag
gacgcaatggttcatcttctcaacctcctatatcccaacctcttcgaaacgagtcctcac
gtcattgaccgtatcatcgaggccatcgaagccatccgcatggcggttggccctggcgtc
gttctcaactatgtatgggcaggcctgttccatcctgcgcgcaaggtacggcagccttat
tggcggctgtacaacgacgcgtacgtccagggtgccgatgccatggtaccatactatccc
aacctggacgaggaaaaggttgacaggtcagagcttgcaatcatgctctaa

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