KEGG   Colletotrichum lupini: CLUP02_05360
Entry
CLUP02_05360      CDS       T08561                                 
Name
(RefSeq) WD domain-containing protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
clup  Colletotrichum lupini
Pathway
clup03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CLUP02_05360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clup03041]
    CLUP02_05360
Spliceosome [BR:clup03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CLUP02_05360
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 PRP4 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_RIG_1st WDR54 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_SPT8 Nbas_N Beta-prop_DCAF4 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 73339377
NCBI-ProteinID: XP_049141510
UniProt: A0A9Q8SM15
LinkDB
Position
3:2112288..2113853
AA seq 521 aa
MMHPSRQAYVEEAMDEDRGIALEDVPVDHDYEIPSAFAGAAPEKTSAVLAQMERKKLAAS
IAVPTDDNRVRTRLREMGEPITLFGEGKPERRDRLRNLLVTQLLANQQEMDGIENGDITM
EDAEDEDEDEQDEEFYTPGGQALLQARIDIAKYSLPRARRRVQFQKAESTIPLRTHVKFR
KQIKEKLDGFELQGSQTAGERHVSMTRLSPNGELVAVGNWGGALKLIEIPSMETQMNLRG
HTQKISGISWYPGSTLPEANVSPDTVNLASGGAEGLVHLWSLNKDTPLSTLTGHGGRVSR
VEFHPSGRYLASASDDTTWRLWDVETTAELLLQEGHSRGVYAVSFNADGSLLASAGLDSI
GRIWDLRSGRTVMILDEHIQPIYALDWGSDGHRVLSGSADGWVKCWDVRKVQRTANLGAH
AKAVSDVRWFRGLDDPIDGHPPGPDEKGAQQPKKAGTFFVSGGFDAKIKIFSADNWGLVQ
TLSGHSGPVASVDVSRDGKWIVSGGHDRTVKLWGRNDGEGV
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgatgcacccttcacgacaagcctacgtcgaggaggcaatggacgaggatcgaggtatc
gcgctggaggacgtccccgtcgaccacgactacgagattccctccgcatttgccggcgcc
gcgcctgagaagacgtcggccgtcctggcgcagatggagaggaagaagctggcggcgagt
atcgcggtgcccacagacgacaaccgggtgcgcacaaggctcagagagatgggcgagccg
atcacgctctttggcgagggcaagcccgaacgcagagaccgcctccggaacctgctggtt
acccagctgctggccaaccagcaggagatggatggcatcgagaacggcgacatcacaatg
gaggacgccgaggatgaggacgaggacgagcaggacgaggagttttacacacccggcggc
caggccctgctgcaggcacgcatcgatatcgcaaagtactccctgccgagggcgcggcgg
cgggtgcagtttcaaaaggccgagtctacgatcccgttgcgtacacacgtcaagttccgg
aaacagatcaaggagaagctggatggcttcgagctccagggcagtcagacggccggcgag
agacacgtcagcatgacgagattatcgccaaacggagagctcgttgccgtggggaactgg
ggcggagcgctcaagctcattgagatcccgagcatggagacccagatgaatctccgagga
cacacacaaaagattagcggtatctcatggtacccggggtccacgctacccgaggccaac
gtgtcacccgataccgtgaacctcgcttccggcggagctgagggcttggtccacctgtgg
tctctgaacaaagatacccccctttcgaccctgacgggccacggcggcagggtatcccgc
gtcgagttccacccttccggccgatatctggcatcggcctcagacgacacgacgtggagg
ctctgggacgtggaaacgacggcggagctactgctgcaagagggccattccaggggcgtc
tacgccgtcagcttcaacgccgacggctccctcctggccagcgcgggcctggacagcatc
ggccgcatctgggatctgcggtccggcaggacggtcatgattctcgacgagcacatccag
cccatctacgcgctcgactggggttccgacggccacagggtgctgtcgggttcggccgac
ggctgggtaaagtgctgggacgtgcgcaaggtgcagcggacggcgaacctcggcgcgcac
gccaaggccgtctcggacgtgcggtggtttcggggcctggacgacccgatcgacggccac
ccgcccggccccgacgaaaagggcgcgcagcagcccaagaaggcgggcacgtttttcgtc
tctggcgggttcgacgcaaagattaaaatcttctcggccgacaactgggggttggtgcag
acgctcagcgggcactccgggccggttgccagtgtcgatgttagcagggacggcaagtgg
attgtcagcggtggccacgaccggacggtcaagctctggggccggaatgatggcgaggga
gtctaa

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