Colletotrichum lupini: CLUP02_05414
Help
Entry
CLUP02_05414 CDS
T08561
Name
(RefSeq) proline-rich
Organism
clup
Colletotrichum lupini
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH2
Motif
Other DBs
NCBI-GeneID:
73339431
NCBI-ProteinID:
XP_049141564
LinkDB
All DBs
Position
3:join(2266146..2266209,2266270..2266409,2266478..2267698,2267796..2267887,2267913..2268259,2268299..2268400,2268498..2268723,2268835..2268862)
Genome browser
AA seq
739 aa
AA seq
DB search
MSLRPIPADDLTTINHLSIDETTNCIMPPPPPPPPPMPAMGGPPPPPPPPGGPPGAGTLP
SRPPPGGRGALLSDITKGRALKKAVTNDRSAPVVGGSSGGVSSGGPPLGGAPPVPGFGGA
PKPPGGLAPPVPGNRARSNSDQSGRESAPAPPTQAAPQLGGLFAGGMPKLRKTRGAVDTG
ASMDSSYLSDPESNVRSSSAPKPPTFGAPKPPGGAAPAPPGRPPLPPPNAAPALPPSIAN
LRKTPSDLPRPGSSASMKGPPPPIGKKPPPLPASRKPSTTPSHPPPLPGSPAPGAPPPPP
PSSAPALPSAPPSAPPPPPAAAAPRAPAPSPPSRSPAPPPPPPASNGPSPLAMQAALRAA
GQASPSAAPPPPPSAAPSPPASAPPPPAAPPTRARAGSGLRSSMLDPSAFTLAPNGAKSP
SPTRTNTMSSLNVGGGGQRYIVQDPRWKFQDDAMLPKPRDFVGGPRRYRAGRGSSSGDQP
RAIYMNQTICTAMILGGNAPLVAAWKRRRGFNFDAFCRWAIVSRQIEDILEDSDSAKSYT
TEQAFATHPEGVVVSALLGPITLAKRSTETNLDLSAVLVLGNLLVFLVFLVPRTMVACRM
LTLNVLFFGWNGGFLQILLQGPSTRSDLESEEEQKITSFKGAITLARCSVFLLDIEPVLE
WIRRCVLVTSVRLRGSPHLPQSLNASRLRIGPMGRTFNPARSRSRSYLSQIDNDNPSCRP
VEPGMLHQPGTLVNATGSQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccgtccaattccggccgacgacctaaccaccatcaaccacctctccatcgac
gagacaacaaactgcatcatgccccctccacctccgccgccgccgccgatgcctgcgatg
ggcggccctcctccgcctcccccgccgccaggaggtcctcctggagctggcactctacct
tcgagaccaccaccaggaggcagaggcgctctactctccgacatcacgaaaggcagggct
ctcaagaaagccgttacgaacgatagatctgcgccggtagttgggggttcgtctggtggc
gtttcctccggaggaccgcctctaggaggtgcgcctccggtcccaggctttggtggtgcc
cctaaacctcccggtggcctcgctcctccggtgcccggaaatcgagctagaagcaatagc
gaccagagcgggcgagaaagcgcgcctgcaccgcccacacaggcagcaccacaattaggg
ggactctttgcgggaggcatgccgaagctgcggaagactcgtggcgccgttgataccggt
gcttctatggactcgtcatatctgtcggatcccgagagcaatgtgcggtcgtcctctgcg
ccgaagccaccaacattcggagcaccaaaacctcctggcggtgcggcgccggccccgccg
ggaaggccgcctttacctcctcccaacgccgcaccggccctgccaccatccattgccaac
ttgcgcaagacgcccagcgatctacctcggccaggctcttcagcatcgatgaaaggacct
ccgcctcctataggcaagaagccgccgccactgccagcatcccggaagccctcgactacg
ccgagccacccgcctccattacctggatcgccagctccaggagcaccccctccaccacct
ccatcgtctgctccagcacttccgtccgcacccccctcggcgccgccaccaccccctgct
gctgctgctcccagagctccagcgccatcgcctccgtcgaggtccccagcacctccacct
cctccaccggcctcaaacggaccttcgccgctggcaatgcaagccgctttacgagcagcc
ggccaggcatctccaagtgctgctccaccgcctcccccatcggcggccccctcgcccccc
gcctctgcacctcctccaccagcagcaccccctacgagggcccgtgctggttctggtcta
cgatcttctatgctagatccaagcgccttcacgcttgctcccaatggtgcaaagagtcca
agtcctactcgaacgaacacgatgagcagtctcaatgtcggcggtggtggtcaacgatac
atcgtacaagatcctcgatggaagttccaggatgatgccatgttgccaaagccaagggac
tttgtaggcggtccccggcgatacagagccggcagaggtagcagtagtggcgaccagcct
cgggcaatctacatgaatcaaacgatctgcactgctatgattcttggtggaaacgcaccc
cttgttgctgcatggaaaagacggagagggttcaatttcgacgccttttgccggtgggct
attgttagtcgccaaattgaggatattctggaggattcggactccgcaaaatcttataca
acggaacaagcattcgcaacacatcctgaaggcgtcgtcgtatcggcacttcttggcccc
attaccttggcgaaacgatcgactgagacgaatctagatctctcggctgtactcgtcttg
ggaaatctcttggttttcttggtattcttggtaccaagaaccatggttgcttgtcgaatg
cttacactcaacgtcctcttcttcggatggaacggggggtttctacagattctcttacag
ggtccaagcactcgcagcgatctggagagtgaagaagagcaaaagatcacgtcattcaag
ggagccatcacgctagcgagatgctcggtctttctgttagacattgaaccagtactggag
tggatccgccgttgtgtattagtcacgtccgtccgtcttcgaggcagccctcatctacct
caatccctgaatgccagtcgcctccgtataggcccgatgggaagaacattcaacccagca
cgatcacgatcacgatcctacctttcacaaattgataatgataacccctcatgtcgtcca
gttgaacctggcatgcttcatcaaccgggcaccctcgtcaacgcaactggtagtcagtaa
DBGET
integrated database retrieval system
