Colletotrichum lupini: CLUP02_05511
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Entry
CLUP02_05511 CDS
T08561
Name
(RefSeq) RecQ family ATP-dependent DNA helicase
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
clup
Colletotrichum lupini
Pathway
clup03440
Homologous recombination
clup03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLUP02_05511
03460 Fanconi anemia pathway
CLUP02_05511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clup03032
]
CLUP02_05511
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_05511
Enzymes [BR:
clup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLUP02_05511
DNA replication proteins [BR:
clup03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CLUP02_05511
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CLUP02_05511
Bloom's syndrome complex (BTR)
CLUP02_05511
FA (Fanconi anemia) pathway
CLUP02_05511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
HRDC
SecA_DEAD
MC4
Motif
Other DBs
NCBI-GeneID:
73339528
NCBI-ProteinID:
XP_049141661
UniProt:
A0A9Q8WEU7
LinkDB
All DBs
Position
3:join(2516662..2517094,2517143..2520618,2520676..2521863)
Genome browser
AA seq
1698 aa
AA seq
DB search
MTRNNLGDHLSWLLSNVALSKPTDLAFPPAHDPSGADSSQSQSRFGSSSSQQELPTRPNP
QSIPGRTHAGSALHVLDAVEQPRDSRVATTGNSASMARLTSSTRPRKPSLAVKQQQPPQQ
LLTPSSTTSGGRFQQAYTAKLRQEDAENERNRDAPSSSKEGKHKPAPAPTPDFLDDDDDE
ILDLTGNDTVLSSDPVGFDDGVTIWNEAHASRPEPLSKRGQKRKSTEMSKAGDLESDSDE
FPDIYKTLGTPAPKGSRSVKGPRTIPSSIRRATTDKGVIEERTITQTISRTQRTYRMSEE
PAGNGTPRRLPMASGGQQVLGRTPSKALRISSSPESNSRVGSLDLQAQKQRSKPRVIQDT
DDEFDDGDLDEELLATPSRHTGSTMPFTNPRSRPASIPLDDTMLSDGLVAPDTPSIPTSS
VLRPESHEAPAETSYAPLPSRDQPTNSTSQQSTSSQTQKSAVLKFILNNRDSLKAREKMI
QDQRDQNLKDYARVLREGTKEDRAQLKIAKELLLKQQAGLEEVSELLNAHAALEDEREPL
AMQIADAYSEGRDTEEEENRLDEIADKVKDLEQSIDELLPGVGIVDETFIEEYRRSKSVV
MSTQPGHKMSSRASRDIPGLTEMDSQVIHQTQFPGSSRLTDPRDHSPPPFPRSRPAAPRS
AKPVAPSAKPRRRDEFEDEFFDDIEDDYGAFIPPPPPVSRPTPNRKSPPKKAGHRAQDMS
SDYGDDADADMLALAHDFELRQSSSAETTRGRSALTSTSGNAVQPLKAVESLKKREPSKA
KLSMPPELMKHPWSADVRKALKDRFRMRGFRSNQLEAINATLGGEDAFVLMPTGGGKSLC
YQLPAIVTSGKTRGITIVVSPLLSLMQDQVDHMSAVNIQAVSLNGETSSQKRSQIFSSFK
ERSPELYIQLLYVTPEMLNNSDNFMRALTSLYSNKRLARIVIDEAHCVSQWGHDFRPDYK
ALGKLRNHFPTVPIIALTATATQNVIVDIKHNLGMDSCQVFSQSFNRPNLTYEVRRKEKE
LIHKIADLIMSKYDGQCGIVYTLSRKTAEQVAEKLRSQYGVKASHYHAQMTPEDRIRVQR
EWQADRIHVVVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGNPSDCILFF
GYQDVATLKKMISQGEGSEAQKERQRMMLNRVTAFCDNREDCRRVEILRYFGEQFNSDEC
EKTCDNCRAGAVFEQQDFSELAVGAIQTIQLHERLTINQCSEILMGKKYQKTIDPHPDDP
HGIAKGMKKHELERIIDRLTAEEALEEENVVNKRAGIAIQYLIPGRNAHLFLNGRRKLLL
SVQVSDRNREPLAPKPKKRTQKSKKNEEQDLDEEPPRRRLPPSTNVSSPAQARRTQDKRS
KGKSLATVIDSDEEDEVLRQEMAEESLSLHANGYIKDGFVMSDNESDDGFEPLPPPRKRG
NASKPVGPRIEEDIRLGALDELHQDVVHNFVQEAKQLEESLRNAQGLRKPLFSEKSFQEM
AIRWTETLPQIRQISGIEPEKVDKFGSKFVPLIKRFHSNYKAMLSFADEDEDMEAEEQSI
VDLISSDEDENMDDEEEEEESSKYFSSGPPPLAPSVQEWNQRMKELDTAPPSRASSSTST
RGRGGARGGRRSGGRKGSSSWASKKQGGGVTKKKASGGANRRSSGGASASRNSAVTSYFS
KGKRGGGGGGSGIGLMPH
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaaacaaccttggggaccatctctcctggctgctaagcaacgtcgcgctatct
aaacccaccgatctcgcctttccaccagcccacgacccctccggtgccgactcttcacaa
tcccagagccgctttggtagctcaagctcccaacaagagcttccgactcgaccaaatccc
cagtcaatacctggcaggacgcatgcaggatctgcacttcatgtcctggacgcggtggaa
cagccacgggactctagggtggcaacaacgggaaactccgcgtccatggcgagattgaca
tcttccacaaggcctagaaagccctcgttggcggtgaaacagcagcaaccgccacagcag
ctgttgacgccctcctcgacgacgagtggtggcagattccagcaagcttacacagctaag
cttcggcaagaagatgcagagaacgagcgaaaccgggatgctccatcatcttcgaaagaa
ggaaaacacaagccggcgccggcacccacgccggacttcctcgacgacgacgatgacgaa
attctcgacctgactggcaatgataccgttttgtcatcagacccagtgggatttgatgat
ggggtcaccatatggaacgaggcgcatgcgtcaagaccggagccgctgagcaaacgaggg
cagaagcggaagagcactgagatgagcaaagcgggtgacttggagtcggattcggacgag
ttcccagacatctacaagacgttgggaacacctgcgccaaagggtagtcgttcggttaag
ggaccgaggacaattccctccagtattcgtcgagcaactaccgacaaaggggtcattgaa
gagcgtactattacacaaacaatcagtcggacccagcgtacctacagaatgtctgaagag
cctgctggcaacggcacaccgcgacgattacctatggcttcgggaggtcagcaggtgctt
ggtcggacaccaagcaaggctttacggatatcgtcaagtccagagtcgaactccagagtc
gggtcactagatctccaagcacagaagcaacgcagcaaaccccgggtaatacaagatacg
gatgacgagttcgatgacggggatcttgatgaagagcttcttgctacaccaagccgccat
acaggctcaactatgccgtttacgaatcctaggtcaaggccggcatcgattcctctcgat
gacactatgctatctgatgggcttgttgctcctgataccccctccatacctacctcatcg
gtgctgcgaccggaaagccacgaggctccagccgagacgagctatgcacccttgccgtct
cgagatcaaccgacgaattccacgtctcagcaaagcacctcttcacagacgcaaaagtct
gctgtgcttaagttcattctaaacaacagagactccctcaaggccagggagaagatgatt
caagaccagcgcgatcagaacctgaaggactatgccagggtcttacgagaaggcactaaa
gaagatcgtgcccaacttaagattgcaaaggaattgttgctgaaacaacaggctgggctg
gaggaagtttctgagctgcttaatgcacatgcggcacttgaagatgagagagagcctctc
gcaatgcagattgccgatgcatacagcgaaggtcgcgatactgaagaggaagagaaccgc
ttagatgaaatcgccgacaaagtcaaagatttggagcagtccatcgatgaacttctccct
ggtgtcggcatagtggacgaaaccttcatcgaagaataccgcagatccaagtccgtggtc
atgagcacgcagcctggccacaaaatgtcttctagggcatccagggatataccaggactc
acggaaatggatagtcaagtcattcaccagacacagttccccgggtcgtcaaggcttact
gacccaagagatcactcgccgccgccgtttccccggagtcgaccggcagctccaaggagt
gcgaaacctgttgcaccaagtgccaagccccgtcgacgcgatgagttcgaagatgaattc
ttcgatgatattgaagacgattacggcgcattcattcctcccccgccacctgtgtctagg
ccaacaccaaatcgaaagagtcctcccaagaaagcgggtcatcgtgctcaagacatgtcc
agcgactacggcgatgatgcagacgcggacatgcttgcactggctcacgacttcgagctt
cggcagtcttcgtctgccgaaacaacgagaggccgcagtgcactgacttcgacatcgggc
aatgctgttcagcctttgaaggcagtcgaatcactgaagaagagagagccttcgaaagcg
aagttgtcaatgccaccagaactgatgaaacacccctggtcagcagacgtgaggaaggct
ttgaaagacagattcaggatgagagggtttcgctctaatcagcttgaggctatcaacgcc
acactcggaggtgaagatgctttcgtgctgatgccaaccggcggcggtaaatccctttgc
taccaacttccagctattgttactagcggcaagacgaggggaattacgattgtcgtctcc
cctctgcttagtcttatgcaagatcaggtggatcacatgtcagctgtcaatattcaagct
gtttcgctcaatggcgagacgagttcccagaagcgaagtcagattttctcttcgttcaaa
gagaggagtccggaactttacatccagctgctctacgtcacgccggagatgctgaataac
agtgacaacttcatgagggccctgaccagtctttactccaataagcggctcgcacgaatc
gtaattgacgaggcacattgtgtcagtcaatggggtcacgactttcgaccagactacaag
gcactaggcaaacttcgcaaccactttcctactgttcccattattgcacttacggccaca
gcgactcagaacgtcattgtcgacatcaagcataacctaggcatggacagctgccaggtc
ttcagtcagagcttcaatcgcccaaatctcacgtatgaggttcggcggaaagagaaggaa
ctgatccacaagatcgctgatttgattatgtccaagtacgacggacaatgtggaatcgtt
tatactttgtcgaggaaaactgcagagcaagtcgccgagaagctgcgttctcagtatggc
gtcaaagcaagtcactaccacgcgcagatgactcctgaggacaggatcagagtacagagg
gaatggcaagcggataggatccatgtcgttgtagcgacaattgcgttcggcatgggcatt
gataagcctgacgtccgtttcgttattcaccattcgatccccaagagcttggaaggctac
taccaagaaacagggcgcgctgggagagacggtaatccttcggactgcattctatttttc
ggttatcaggatgtagccacactgaagaagatgatttcgcagggcgaaggaagcgaggca
caaaaagaacggcaacgaatgatgctcaatcgagtcactgcgttctgcgacaaccgggaa
gactgtcgccgcgttgagattcttcgctactttggcgaacagttcaactctgacgagtgc
gagaagacctgcgacaactgtcgagcaggcgctgtctttgagcagcaagacttctctgaa
cttgccgttggagctatacagaccattcaacttcacgagcgcctgactataaaccagtgc
agtgaaatcttgatgggaaagaagtaccaaaagacaatcgatccgcatcctgacgatcct
catggcatcgcaaaggggatgaagaagcatgaactcgaacgcatcatcgatagacttaca
gctgaggaggccctagaggaggagaatgtggtgaacaagagggccggtatcgcgatccag
tatctcatccctggtcgcaacgcccacttatttctcaatggccgacgcaaactattgtta
tcggtccaggtttctgataggaatagggaaccattggcaccaaaacccaaaaagcggaca
caaaagagcaagaagaacgaagagcaggatctggacgaagaaccgccgaggagacgcctg
ccgccttcgaccaacgtgtcttcgccagcgcaagctcgaagaacgcaagacaagaggtca
aagggcaagtcccttgcgaccgtcatcgattctgacgaggaagacgaggtgctaaggcaa
gagatggcagaggaaagtctttcgctacacgcaaacggctacatcaaggatggctttgtc
atgtccgacaatgaatctgacgatggattcgagccactgcccccacctcgaaaacgtggg
aatgcctccaagccggttgggccccgtatcgaggaggacatacgactaggggcacttgac
gaactgcaccaagacgtcgtccacaattttgtccaggaggctaagcagctcgaggagtct
ctgcggaatgcgcaagggctccgaaaacctctgttttccgagaagagtttccaagaaatg
gctatccggtggacagagactctccctcaaatacgacaaatttcagggattgagccagaa
aaggtggataagtttgggagcaaattcgtgcccctgataaagcgttttcacagcaactac
aaggcaatgctcagctttgcggacgaagacgaagacatggaagccgaagagcagagcatt
gtcgatttgattagctccgacgaagacgagaacatggatgatgaggaagaggaagaggaa
tcttcgaagtatttcagtagtggaccgcctcccctcgcgccttctgtccaggaatggaac
cagcgaatgaaggaactagatacggcgcctccgagccgagcctcatcgtcaacttcgaca
agggggcgtggtggtgctcgaggcggtcggagatcagggggtcgcaagggctccagctca
tgggcaagcaagaaacaaggaggcggcgttaccaagaaaaaggcttctggcggggcaaac
agaagaagcagcggcggagcatcagcttcgagaaacagcgccgtgaccagctacttctcc
aagggaaagagaggtggtggcggtggcggcagcggtatcgggctaatgccacactga
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integrated database retrieval system
