Colletotrichum lupini: CLUP02_05562
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Entry
CLUP02_05562 CDS
T08561
Name
(RefSeq) Sec63 Brl domain-containing protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
clup
Colletotrichum lupini
Pathway
clup03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLUP02_05562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clup03041
]
CLUP02_05562
Enzymes [BR:
clup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CLUP02_05562
Spliceosome [BR:
clup03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CLUP02_05562
Complex C
U5 SnRNP specific factors
CLUP02_05562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
BRR2_plug
PWWP
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
73339578
NCBI-ProteinID:
XP_049141711
UniProt:
A0A9Q8SND6
LinkDB
All DBs
Position
3:complement(join(2666820..2666861,2666914..2667438,2667543..2667716,2667768..2668119,2668190..2668679,2668765..2669269,2669324..2669380,2669587..2669717,2669777..2669917,2669955..2676495))
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AA seq
2985 aa
AA seq
DB search
MSNQDQHRDVSQYKYSAMSNLVLQADRRFVSRRNDEATGDPESLAGKLSIRDMGARVARE
IAPKQKKSTGLTGVERGSLQEGEDVLAREQKKKGEKAQPRGAGVLGTGDLFVEGIRYRPR
TPATRATFELILKIVSDNLGDVPQTAVISAADVTLEFLKDDDLKDTEKKREIDDLLGVSM
SAKEFNELVNLGKKVTDYDAQDEDEDMDDNAEDADGAELDERQGVAVVFEDSDDEEGGIV
NEVREESSEDEEADEDEDEPAADANDAMDMEDDAMVIDSAPRKQAQESKQAKSVSARDID
AFWLQRQIGKLYADSHEQHDKTTDALRILSGEPDEQGGEDKSLREIENDLMELFDYEHHE
LVQLLIENREKVVWLTRHSRAETDEERAVVEREMASEGLQWILNEKFGKKGDDQKGRKME
IKMDLDAPSSLTNAPPAEDERPQGLVGGLQPRKLINLENLVFDQGNHLMSNPKVRLPEGS
TKRTFKGYEEIHVPPPKKRSDASDTLVPITEMPEWSRLPFGTTKSLNKIQSKCYPTAFGD
DGNMLICAPTGSGKTNVAMLTILREIGKNRNPETGDIELDNFKIVYIAPLKALVQEQVGN
FGKRLEPYGVKVSELTGDRQLTKAQIAETQIIVTTPEKWDVITRKATDLSYTNLVRLVII
DEIHLLHDDRGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYKDVASFLRVDISTGLF
HFDGSFRPCPLRQEFIGVTDRKAIKQLKTMNDVTYNKVIEHVGAKGNQMLIFVHSRKETA
KTARYIRDKALEMDTINQILRHDAGSREVLNEAASQATDKDLKDILPYGFGIHHAGMNRI
DRTDVEDLFARGAIQVLVCTATLAWGVNLPAHTVIIKGTSVYSPEKGSWVELSPQDVLQM
LGRAGRPQYDTYGEGIIITTQNEIQYYLSLLNQQLPIESQFVSKLVDNLNAEIVLGNVRS
RDEGVEWLGYTYLFVRMLRSPGLYQVGAEYEDDEALEQKRVDLIHSAASVLRKSNLIKYD
EKTGKLQSTELGRIASHYYITHGSMETYNNLIQPSITTIELFRVFSLSAEFKYIPVRQDE
KLELAKLLGRVPIPVKESIEEPHAKINVLLQAYISRLKLDGLALMADMVYVTQSAGRILR
AIFEITMKKGWASVAKTALDLCKMAEKRMWPTMSPLRQFPNCPRDIVQKSERIEVSWSNY
FDLDPPRMGELLGMPKAGRTVCGLVAKFPRVEVQAQVQPLTRSMLRVELSIAPNFEWDVE
IHGPAESFWIFVEDCDGEDILFSDQFLLRKEYAESESNEHIVDFTVPITEPMPPNYFISV
VSDRWMHSETRLPVSFHKLILPERFPPHTELLELQPLPVAALKAKEYAKLYPDWDHFNRI
QTQTFNSLYNTDQNVFVGAPTGSGKTVCAEFSLLRHWSKADAGRVVYIAPFQELIDSRLD
DWQKRLGGLRGGKTIEKLTGETTTDLKILERSDLILATPIQWDVLSRQWKRRKNVSTVEL
FIADEVHLLGNNMGYVYEIIISRMHYIRTQTELPMRIIALGVSLANARDLGEWIDAKKHD
IYNFSPHVRPVPLELHIQSYTNPHFPSLMLSMAKPTYLAITQMSADKPAIVFVPSRKQTR
ATTRDLLTAAFMDDDEDRFLHAEVEQMRPLLDRISEEALAESLSHGVGYYHEALSQSDKR
IVKHLYEHGAIQVLVASRDVCWELNSTAHLVIVMGTQYFEGREHRYVDYSLSEVLHMFGK
ALRPSKDGRGRGVLMLPSAKREFYKKFLNEALPVESHLHNYLHDAFVTEISTKMIESGDD
AINWTTFTYFYRRLLANPSFYSLTSTTQDGLSDYMSDLIQTTLQELSDSKIIELDEDDGS
VAPQNAAMIAAYYNISYITMQTFLLSLSAKTKLKGVLEIITSATEFEAIQIRRHEEGILR
RIYDRIPVKMAEPVYDSAHFKAFVLLQAHFSRMQLPIDLAKDQEVIISKVLSLLSATVDI
LSSDGHINAMNAMEMSQMVVQAMWDRDSPLKQIPHFTPEVVKVANEFGYVPIYAVLICKT
NVEFSHSVKDIFDFMEAMNPEENPDYAKLVKRLGLSQKQLGEAAAFTNDKYPDIELEHSV
LDEDDIRANEPAYLSVQIQRQVEEDEEFDPTVHAPFYPAKKLENWWLVVGEQTTKNLLAI
KRVTIGRELKVKVEFTVPTAVTSEWIKSANFPSRLRRVWTWTTAMRKRTRNRRLGRWQNH
LVRTISQFLRPYQKPSTGGSCPLSTGLNCLKTGCADSVRCDSSCGGASAAKRTFGGLGID
RATSTFPLTGSRVSAVIRVQLQEFLRSSFSRPLPFSATTTRGAPNRAHHPSCSQIIFYHR
RDNKKSRTARITTRVSSFDPSPLVFGVATCLFTPSIPLQPSFQAIATSPTMSDEPTTSGQ
SAPAATEEVEKKVEGTSPAAEASEAPATAASDAKPSESEAAAKETTEDAQKDDSKNKDSA
ETKDAESSGKTDEQSKDEDVEMKDVTDGAEAKETSDAVANDAEQAPAADADAADATADKS
KSRRRSSGIPEHKGKKLSKKASKAKFFNTNAQPGDHFLVKLKGYPQWPVIVCDEEMLPET
LLKSRPVTAKRADGTYREDFADGGKRQNDRTFPVMYLRTNEFGWVPNSALQELNSEKATE
LLTDKVKKVELRDAFELAIEQHPLDYYKDELQKYQDEVAQKQAAKDAREAAKKNKKKTPA
VISDDDVDMADAADEEEEVPEPKEKTKSKKRKADEEAISTPARTDSAKKPKIKLNTSSTP
KTTNGTATPKSAKESAAKPAKSKSAKKEGAEKKAEKEKEVLFLRHKLQKGLLTRDQEPKE
EEMKMMSDYITKLESFPDLEVSIIRATKINKVLKAILKLDSIPKEEEFNFKSRSQTLLDK
WTKILSGGDAAAASATPAPTNGVNGTSGKTEEKKETSATPNGAKEESKEAEKSEDSEKQT
EKEASAKKSEEPEKAEEKPEKAEKPAEEPSEKEASAAPETDEVKS
NT seq
8958 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaagaccaacaccgcgatgtatcccagtataagtactcggccatgtccaac
ctggtcctccaggcggaccgtcgttttgtttcaagacgaaatgatgaggccacgggcgat
cccgagtctctcgctggaaagctgagcattcgcgacatgggagctcgcgtcgctcgcgaa
atcgcaccgaaacaaaagaagtcgactggccttaccggcgtggaacgcggtagcttacag
gagggcgaggacgtgctagctcgcgagcagaagaagaagggcgaaaaggcacagccgaga
ggtgctggtgtcctgggaactggagacctgttcgtcgagggcatccgataccgcccgcgc
acaccggcaacacgggcgacgttcgaattgatactgaagatcgtttctgacaatcttggc
gatgtcccccaaactgccgtgatcagcgccgccgacgtgactttggagttcctgaaggac
gacgacttgaaagacacagagaaaaagagggaaattgacgatcttttgggtgtctcaatg
agcgcgaaggaattcaacgagctcgtaaatctcggaaagaaagtcacagactacgacgcg
caagacgaggatgaggatatggacgacaatgcagaagacgccgacggagccgaattagac
gaaagacagggtgtcgcagtcgttttcgaagattccgatgatgaggaaggaggcattgtg
aatgaagtcagggaagagtcctccgaggacgaggaagcggacgaggatgaggacgaaccc
gccgccgacgcaaacgatgcgatggacatggaagacgacgccatggtcatcgattcagcc
cctcggaagcaagcacaggaatcaaagcaggcaaagagtgtctctgctcgagacatcgat
gcattttggctgcagcgacagatcggaaagctctatgcggattcccacgaacagcacgac
aagacgaccgacgctttgcgcattctttccggcgaacctgatgagcagggcggagaggac
aagtcactcagagagatcgagaacgacctcatggagcttttcgactacgagcatcacgaa
ttagtccaactccttattgagaacagggagaaggtggtttggctcactcgtcattcaagg
gctgagacggatgaagagcgagctgtggtggagcgcgaaatggcttccgaaggtctgcag
tggattcttaatgagaaatttggaaagaagggcgacgaccaaaaaggacggaagatggaa
atcaagatggaccttgatgccccatcatcactcacaaatgctccccccgcagaagacgag
cgcccccagggattggtgggtggtttgcaaccgcgcaagctcatcaacctggagaacttg
gtcttcgaccagggcaatcatctcatgagcaaccccaaggtcaggttgccggaggggtca
acaaaacgaactttcaagggatacgaagaaatccacgtgccccctcccaagaagcgcagt
gatgccagcgacacactcgttcccataaccgaaatgccagaatggtcccgcctacccttc
ggtaccaccaaatccctcaacaagatccagtcgaagtgctacccaacagcctttggcgac
gatggcaacatgctgatttgtgcacccactggtagtggaaagacaaatgtggcaatgctt
acaattcttcgagaaatcggcaagaaccgcaatcctgagactggcgacatcgagctggat
aacttcaaaatcgtgtacattgcgcccttgaaggcgttggtacaggaacaagttggcaac
tttggaaagcgacttgaaccctatggtgtcaaggtctctgagttgactggtgaccgtcag
cttaccaaggctcaaatcgccgagacccagatcattgtcactactcctgagaagtgggac
gtcatcacgagaaaggctaccgatctctcttacacaaacctagtgcgcttggttatcatc
gacgagatccacttgctccacgacgaccgtggtcctgttctggagagcatcgtcagcaga
actatcaggaagactgagcagactggcgagcccgtccgtctggttggtttgtctgcgaca
ctgccaaactacaaggatgttgctagcttcttgcgtgtggatatcagcactggtctcttc
cactttgatggtagtttccgtccctgccccttgcgccaagaattcattggagtcacggat
cgcaaggccatcaagcagctgaagaccatgaacgatgtcacatacaacaaggtcattgag
catgtaggagcgaagggaaatcagatgctcatattcgttcactcacgaaaggagactgcc
aagactgcgcgctacattcgtgataaggctctagagatggacactatcaatcagattctt
cgtcacgatgcaggaagtcgcgaggtgctcaacgaagcggccagccaagccaccgacaag
gacctcaaggatatccttccttacggtttcggtattcatcatgctggtatgaaccgcatc
gatcgtacagatgttgaggacctcttcgcccgtggcgctattcaagtccttgtctgtacc
gcgacccttgcttggggtgtcaacctgccagcgcataccgtcattatcaaaggcacttca
gtatactctccagagaaaggtagctgggttgagctcagcccccaggacgtcctgcagatg
cttggacgtgccgggcgtccacaatacgatacctatggcgagggcatcatcatcacaacc
cagaacgagatccagtactacttgtcgctcctcaatcaacaattaccaatcgagagtcaa
ttcgtcagtaagctcgtggacaacttgaacgccgagattgtgctcggcaacgtccgcagt
agagacgagggtgtcgaatggcttggctacacctacttgttcgttcgtatgctacgttcg
cccggcctctaccaagttggcgcggaatacgaagatgatgaggctttggaacaaaaacga
gttgatttgattcattctgctgcttcagtactaaggaagtcaaatcttatcaaatacgat
gagaagaccggcaagctccagtcaacggagttggggcgtatcgcttcccactactacatc
acacatggctctatggagacttacaacaacctgattcaaccctcaatcacaaccattgag
ctgttcagagtattctctctgagtgcagagttcaagtacatccccgtgcgtcaggatgaa
aagcttgagcttgccaagttgttgggcagagttccgatcccagttaaggagagcatcgag
gagcctcacgcgaagatcaacgtgttgctgcaagcctacatctcacgacttaagttggac
ggtctagcccttatggctgatatggtctacgtcactcaatccgctggtcgtattctccgc
gccatcttcgaaattaccatgaagaagggatgggcgtctgtggccaagaccgccttggat
ctttgcaagatggcagagaagcgcatgtggccaaccatgtcaccacttcgtcagttcccc
aactgccctagagacattgtgcagaagtcggagagaatcgaagtgtcttggagcaactac
ttcgacctcgatcctcctcgaatgggagaattgcttggcatgcccaaggccggcagaact
gtctgtggcttggttgccaagttccccagagtggaggttcaggctcaagttcagccactt
acgagatccatgcttcgagtcgagttgagcatcgctcccaactttgagtgggatgtcgaa
atccacggcccagcggaaagtttctggatcttcgtcgaggattgtgatggagaggatatc
ctcttcagtgaccaattcttgctgcgcaaggagtacgccgagtctgagtcgaacgagcac
attgtcgacttcaccgtgccgatcacagagccaatgcccccgaactactttatctcagtt
gtgtctgatcgctggatgcattccgaaacaagattgccagtatcattccacaagctgatt
cttcccgagaggtttcctccccacactgagctccttgagcttcagcctttgcctgttgcg
gcgctgaaggccaaagagtatgccaaattgtaccctgactgggaccacttcaaccgcatc
cagacgcaaactttcaactcgctgtacaacaccgatcagaatgtgttcgtgggtgcgccg
acgggaagtggcaagacggtatgcgcagagttttctctactgcgacactggtctaaggca
gacgctggacgtgtagtctacatcgcacccttccaggagctgatcgactcacgccttgat
gactggcagaagaggcttggcggtctccggggtggaaagactatcgagaagctcacggga
gaaaccactaccgacttgaagattctggagcgtagcgacctgattcttgcgactcccatc
caatgggatgtattgtcccgccagtggaagcgcaggaagaacgtttccactgtcgagctt
ttcattgcagatgaggttcatctgctcggaaacaacatgggatatgtctacgaaatcatc
atttcgcgaatgcactacatccgaacccagactgagcttccaatgagaattatcgcgctt
ggtgtttcccttgccaacgcccgcgacctcggcgagtggatcgacgcgaagaagcacgat
atctacaacttcagcccgcacgtccgccctgtacccctcgaacttcacatccaatcttac
accaatcctcacttcccttcactgatgctgtctatggcgaagccgacttacttggccatc
acgcagatgtccgctgacaaacccgctattgtgtttgttccgagtcggaagcaaacacga
gcgaccacgcgtgatctgctgacagctgccttcatggatgatgacgaagaccgtttcctg
cacgctgaggtggagcagatgcgccctcttcttgatcgcatttccgaagaagcactcgcc
gagtctctttctcacggcgtgggatactaccacgaggctttgagtcagagcgacaagcgt
atcgtcaagcacctgtacgagcatggagctattcaggtgcttgttgcttctcgtgacgtt
tgctgggagctcaacagcactgcccacctcgtcatcgtcatgggcacgcaatatttcgag
ggtcgcgagcatcgctatgtcgattactccctaagcgaagtcttgcacatgttcggcaag
gcactccgaccttccaaggacggcagaggccggggcgttcttatgcttccgtcagccaag
agagaattctacaagaagtttttgaatgaggctctccctgtcgagtcacatctccacaac
taccttcacgatgcctttgtcaccgagatcagcacgaagatgatcgagtctggtgatgat
gccatcaactggacgacgttcacctacttctacaggcgtctcctggccaaccccagcttc
tacagcttgaccagcactacgcaggatggtctcagcgactacatgtcggatctcatccag
accaccctgcaagagctgagcgactccaagatcattgagcttgacgaggacgatggctcc
gttgcgccgcagaacgcggccatgattgcagcatactacaacatctcctacatcactatg
cagacgttcctcttgtctctgagcgccaagaccaaactcaagggcgttttggaaattatc
acatcggctactgaattcgaagctatccagatcaggaggcacgaggagggcattctccgc
aggatctacgaccgtattcctgtcaagatggcagagcctgtgtatgattcggcccatttc
aaggcctttgtcctcctgcaggcgcatttctcgcgaatgcagctgccgattgatttggcc
aaggaccaagaagtcatcatttccaaggttctcagtctcctgagtgcaacggttgatatt
ctctcatctgatggccacatcaacgccatgaacgccatggaaatgtcgcagatggttgtg
caggcgatgtgggatcgcgatagccccttgaagcagattcctcactttacacctgaggtt
gtgaaggtggcaaacgaatttgggtatgtaccaatttatgcagtgctgatttgcaaaact
aacgtcgaattttctcacagtgtcaaggatatcttcgatttcatggaagccatgaacccc
gaagagaacccggattacgccaaattggtcaagcgtcttggtctctcgcagaagcagttg
ggtgaggctgccgccttcaccaatgacaaataccccgacattgagcttgaacacagtgtc
ttggatgaggacgatatcagagccaacgagcctgcgtaccttagtgtgcagatccaacga
caagtggaggaggatgaggagtttgacccgactgtgcacgcaccgttctacccagccaag
aagttggagaactggtggcttgttgtaggggagcagacgacgaagaacttgcttgccatt
aagcgtgtcacgatcggacgggagctgaaggtgaaggtggagtttacggtgccaacagct
gttacgtcggagtggatcaagagcgcgaattttccatcacggctgcggagggtatggacg
tggacgacagcgatgaggaagaggacgaggaatagacggctcggcagatggcagaaccat
ctcgtccgtacaatatcgcaatttcttcgcccttatcagaaaccatctacaggcggctct
tgtcctctttcgacagggttgaattgcctgaagaccggttgcgcagacagtgtgcggtgc
gacagcagttgcggtggtgcctcagcggccaagcgaacgttcggtgggctgggcattgac
cgggccacgtccacgttccctctcacaggctcacgtgtctccgccgtcatccgcgtccaa
ctccaagagtttctgcgttcatctttttccaggccattgcctttttctgctaccacaaca
cggggagctcccaatcgcgcccatcatccttcctgcagccagattatcttctaccatcgt
cgcgacaacaaaaaatcacgaaccgcgcgtatcacgacgcgtgtttcttcctttgaccca
tcgccattagtctttggcgtcgcgacttgcctatttaccccatccatacccttgcaaccc
agcttccaagctatcgccacatcaccgaccatgtctgacgagccgaccaccagcggtcaa
tccgcgcctgccgcgactgaggaggtggagaagaaggttgaaggaacctcgcctgctgct
gaagcttctgaggcgcccgcgactgctgccagcgacgcgaaaccatctgagtctgaggca
gctgccaaggagaccaccgaggatgcgcagaaggacgactccaaaaacaaggattcagct
gagaccaaagacgcggaatcatccggcaagacagacgaacaatccaaggacgaggacgtc
gagatgaaggacgtgacagatggagctgaggcgaaagagacatctgatgccgttgccaat
gatgctgagcaagcgccagctgctgacgctgacgccgctgatgcgacagctgataagtcc
aagtcgcgtcggagatcgtccggtattccggaacacaagggcaaaaagcttagcaagaag
gcatcgaaggcgaagttcttcaacaccaatgcgcaacccggcgatcacttcctcgtcaag
ctcaagggataccctcaatggcccgtcattgtctgcgacgaggaaatgctccccgagacc
ctgctcaagagccgtcccgtcaccgcgaagcgtgccgacggcacgtatcgcgaagacttt
gctgatggtggcaagcgtcaaaatgaccgcacattccccgtcatgtacctccggacgaac
gaattcggttgggtaccaaactctgctctccaagagctgaactccgaaaaggcgaccgag
ctcctcaccgacaaagtcaagaaggtcgagttgcgcgatgccttcgagctcgccatcgag
caacacccccttgattactacaaggacgagcttcagaaataccaagatgaagtagctcag
aagcaggccgccaaggatgccagagaggccgcaaagaagaacaagaagaagactcctgcg
gtcatttcggacgatgatgtcgacatggctgatgctgcggacgaggaggaggaggtcccc
gaacctaaggagaagaccaagtccaagaagagaaaggcggacgaagaagccattagcacc
ccggcacggactgattctgccaagaagcctaagatcaagctgaacacatcctccactcct
aagacgacaaacgggacagctacaccaaagtcggctaaagagtcagccgctaagcctgcg
aagtccaaatcagccaagaaggagggtgctgagaagaaggcggagaaggaaaaggaggtt
ctcttcttgcgccacaaacttcagaagggcttgcttaccagagaccaagagccgaaggag
gaagagatgaagatgatgtcagactacattactaagcttgagagcttcccagatcttgag
gtctcgatcattcgggcgaccaagatcaacaaggtcctcaaggctattctcaagcttgat
tccatccccaaagaggaggaattcaacttcaagagtcgttcgcagacgctccttgacaag
tggaccaagattctcagtggtggtgatgccgctgctgcgtccgcaactccggctcccacc
aatggtgtcaatggcacctccggaaagactgaggagaagaaggagacttctgccactcct
aacggtgctaaagaggaaagcaaggaagctgaaaagtccgaggattctgagaagcagacc
gaaaaggaggcaagtgcgaagaagtccgaggagcctgaaaaggcagaagaaaagcccgaa
aaggccgagaagcccgctgaagagcccagtgagaaggaggcatctgcggccccggaaacg
gatgaggttaagtcttag
DBGET
integrated database retrieval system
