Colletotrichum lupini: CLUP02_05791
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Entry
CLUP02_05791 CDS
T08561
Name
(RefSeq) histone-like transcription factor and archaeal histone
KO
K08065
nuclear transcription Y subunit beta
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clup03000
]
CLUP02_05791
Transcription factors [BR:
clup03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
CLUP02_05791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
CENP-T_C
Bromo_TP
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
73339806
NCBI-ProteinID:
XP_049141939
UniProt:
A0A9Q8SN53
LinkDB
All DBs
Position
3:complement(join(3353811..3354023,3354110..3354237,3354314..3354424,3354759..3354915))
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AA seq
202 aa
AA seq
DB search
MSDSPQSPPKDVDQGVQSPEEEQMNEAQDPQSGGLTYEFEVKEQDRWLPIANVARIMKNA
LPENAKIAKEAKECMQECVSEFISFITSEASEKCHQEKRKTVNGEDILFAMTSLGFENYA
EALKIYLSKYREQSQSNRGETSHRPGSSGYGANPPTGAGSFQAEPQNSVLGGQQGDGTAD
AQGYMYGAQTGYNGTGGADGYQ
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactccccccaatctcctcccaaggatgtcgaccaaggtgtacaatcaccggaa
gaggaacaaatgaacgaggctcaagacccacagtccggtggactcacctatgagttcgag
gtcaaggagcaggaccgctggttgcccatagccaatgtcgcccgcatcatgaagaatgcg
ctccctgaaaacgcaaagatcgccaaggaagcgaaagaatgcatgcaggaatgcgtcagc
gagttcatctcgttcatcacgagtgaggcctcggagaagtgtcatcaggagaagagaaag
acggttaacggagaagacattctattcgccatgacttctttggggttcgagaattacgca
gaggccctcaagatctacctctcgaaatacagagaacaatcccagtccaacaggggagaa
acctcccaccgtccaggcagcagtggctacggcgccaacccgccaaccggagcaggaagt
ttccaagccgagccacaaaacagcgtcctcggaggccagcaaggagatggcaccgccgac
gctcagggctacatgtacggcgcgcagacagggtacaatggtaccggcggtgccgacggc
taccagtaa
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