Colletotrichum lupini: CLUP02_06216
Help
Entry
CLUP02_06216 CDS
T08561
Name
(RefSeq) uncharacterized protein
KO
K14289
exportin-5
Organism
clup
Colletotrichum lupini
Pathway
clup03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLUP02_06216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clup03016
]
CLUP02_06216
03036 Chromosome and associated proteins [BR:
clup03036
]
CLUP02_06216
Transfer RNA biogenesis [BR:
clup03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CLUP02_06216
Chromosome and associated proteins [BR:
clup03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
CLUP02_06216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
APC1_C
Arm
Motif
Other DBs
NCBI-GeneID:
73340226
NCBI-ProteinID:
XP_049142359
UniProt:
A0A9Q8SNR9
LinkDB
All DBs
Position
3:join(4907514..4908401,4908471..4908659,4908710..4909175,4909234..4909361,4909411..4910070,4910123..4910265,4910317..4910918,4911198..4911976)
Genome browser
AA seq
1284 aa
AA seq
DB search
MDGRTPNGAAGMAQNATSTNGGNPDIISQIHQALEVIHSPYSSNESRRDAQLFLENIKGI
DEAPFHGFTLASNKSQSPVVRHYALSLLEHAIKQKWAEYNEQQSTMLREWVMELCRTLSK
EDPLYIRNKTAQLWVEVAKRCWGAEWMDMDELLVRIWQIPDSPVHKELVLFVLETLSDEV
FNGDDAVVAMREGVLSRSCVEVFTPASVLREAFPNRVAGPEVRSGEEGWLSRVSEFLSQC
LDGDAPNNDQIRSCAVKSLTVFYSLMPWAIPKSVAVANCVPVMCRALATPEVSIQKASLE
ALHALYSRSNFSEQEFKDLVAPMYDASQVDLMKRLFEWSAVDVEDIDEDKYQFGKKFSEM
LSLLGNYLDRRFSAISTNSDVSGFLNLLLLTVQSQSLIIAIPVLATWTRLLNNRLIGQSP
ANSHLVGPLLEVCGSRLIRYENLPEDTQDQTFMFLMEDTDTVPERHAFLGNYRRYSTQVI
ETIVQLKLSDAVYHVLGQAEHVLQHLYDESPPMNVATYFKHSMPVLRVDAQFTVIEAALK
GYMKWRASTTQQSLPDYEQQRAALERDLESWCTKLLEMKFEDPLIRKRVLQLLVAFSTTA
LDKKPGFMLKVLEHILMTWPAPQPEHRAFNEAIKDFQSESMVELQRLASKVPDHLLAVYD
QIEAKVNDMISSGSLDEKRQIAYQSFLFIIIHRASNIDPAKQVERLQQFIKPVTSSWQNQ
ELKNALSSYSGFCELMALDKAKRYLMSHRVHEVKEWGSCELDAEGLALQAELEERQKMLP
LRPTKSFLSFSVEKLEKTSTPFQISYQLWNDSFPLILPDLLQFLSHAHASHNPDNWTELP
NEMKSVVGNVLSDRFWQAGISEGSKDEFYARVMDKKNTLEGLASTIRGTVRFVRETCYAI
IYCMSRLEMQFYGFSELPGPLAQALFQNSFHLSAHQQINLLNLVRYLVDDCPLEQREHFL
PPLLAACFQQMDAKINAEWENLERQQAIQAAADALTEEMKSESILRQVTYTAVIMVADFL
DPTKRNPPPLRSQNGQEQSRKYPSLRKFCLMQSTVVAPLLLFCTHAIRMRDTRCCSIILR
VFRSIVPDFTVAEPLSPKSLPQDGAEVAPSSRDPYLDTSPVSAEAATAIREYIASDVLRA
CITSFHEPYFVDLQKDLASLIAAIVVYYSPVTSTPRDILMSLPNIRQADLDRLNDFVAKP
ASHTRQQRALVLDLLKDLKGVSIAEMGKLPKNSGFGRSKRSNRSKMAQEFMTPANESRTR
GGGVADGGRATPDALEGVAGLFEG
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggacggccggacgcccaatggcgcagccggtatggctcagaacgctacttccaccaac
ggtggaaaccccgacatcatctcccagatccaccaggccctcgaggtcatacacagtcct
tactcttccaacgagtcccgccgagacgcacagcttttcctcgagaatatcaagggcata
gacgaggcccccttccacggattcaccctcgcatccaacaagtcgcagtcccctgtcgtg
cgccactatgctctctctttgctcgaacacgcaatcaagcagaaatgggccgaatacaac
gagcagcagtctaccatgctgcgcgaatgggttatggagctttgccgcaccctgtcaaag
gaagacccgctatatattaggaacaagacagctcagctgtgggtagaagtcgcgaagaga
tgctggggagccgagtggatggatatggacgagctcttggtacggatttggcagatccct
gactctcctgtccacaaagagctcgtccttttcgtgcttgagaccctgtccgacgaggtc
ttcaatggcgacgatgctgttgttgccatgcgcgaaggcgtcctcagcagaagctgcgtc
gaagtctttaccccagcttccgttctcagagaggcatttcccaacagagttgcaggcccc
gaagtgcgctctggggaagaaggttggctaagcagggtatccgagtttctcagtcaatgt
ctcgacggtgacgcaccaaacaacgaccaaatccgctcctgcgccgtgaagtccttgact
gtgttctattccctcatgccatgggccatcccaaagtctgttgccgttgcaaactgcgtt
ccggtcatgtgcagggctcttgcaactcccgaggtgtccattcaaaaggcctcgctggaa
gctctgcatgcgctctactcccgttccaacttttcagaacaagagttcaaggaccttgtc
gcgcccatgtatgatgctagccaagtagacctcatgaagaggctctttgagtggtctgct
gtggatgtggaagacattgacgaggacaaataccaattcggcaaaaagttctcagagatg
ctgtcccttctcggcaactacctcgaccggcggttctctgccatatctacaaactcggat
gtcagcggttttctcaacctgctgctgcttaccgttcagagccagagtctcatcatcgcg
attccagtcctggcaacctggacacgtctcctcaacaacaggctaattggacaaagccca
gccaacagtcatctcgttgggcctcttcttgaagtatgcggctctcgcctgatacgctac
gagaatctgcccgaagacacccaagaccagacctttatgttcctgatggaggataccgat
accgttcccgagcgtcacgcgtttctcggcaactaccgaagatacagcactcaagtcatt
gagaccatcgtccagctcaagctatccgacgcagtataccacgttcttggtcaagcggaa
cacgttttgcagcatctgtatgacgagagcccgccaatgaatgtcgcgacgtatttcaaa
cactctatgcctgttcttcgtgtcgatgctcagtttacagtcatcgaagccgcactcaag
ggctacatgaaatggagagcaagcaccactcagcagagcttaccagactatgagcaacag
cgtgctgcactagagagggatttggagtcgtggtgcaccaaacttctggagatgaagttc
gaggatcctctgattcgcaagagagttttacagctgttggtcgccttctcaacaacagca
cttgacaagaaaccaggcttcatgctcaaggttctcgagcacattttgatgacctggccg
gcgccccagccggaacatcgtgctttcaatgaagcgatcaaggacttccagtctgagagc
atggtagagttgcagaggctagcgtccaaggttcctgatcacttgctcgcggtttatgat
caaatcgaggcaaaggttaacgacatgatctcgtctggttctctggatgagaaacgccaa
atcgcttatcaaagcttcctcttcatcatcattcaccgagcatccaacatcgatccggcc
aaacaggttgaacgactccagcaattcatcaagcctgtcacatcctcatggcagaaccaa
gagctgaagaacgcattgtcatcgtactctggcttttgtgaattgatggccttggacaag
gcaaagagatacctgatgagccaccgcgtacatgaggtcaaggaatggggttcctgcgag
ttggatgcggagggtttggctctacaggctgaattggaggaaaggcaaaagatgttgccg
ctcaggcctaccaagtctttcctatcattctctgtcgagaagcttgagaagacgtcgacg
ccattccagatctcgtaccagctgtggaatgacagctttccgctgatccttccggatctt
ttgcagttcctcagccatgcccacgcctcccacaacccggataactggacagaactgccc
aacgagatgaagtctgttgttggcaacgtgctcagcgaccgtttctggcaagcaggcatt
tcagagggcagcaaagatgagttctacgcaagggtcatggataagaagaacacactcgaa
ggtcttgcatcgacgatccgcggaaccgtaaggtttgtaagggaaacttgttacgcgatc
atctactgcatgagtcgtttggagatgcagttttacggcttcagcgagctgcccggtccg
cttgcgcaagcactcttccagaactcattccacctgtcagcacatcagcaaatcaatctg
ctcaacctcgtcaggtatcttgtggatgactgtcccctcgagcagcgagagcatttccta
cccccacttctagctgcctgcttccagcaaatggacgccaagatcaatgccgaatgggag
aacttggaacgtcagcaggccatacaggcagctgccgatgctctgacggaggaaatgaaa
tcagagagcatcttgcgccaagtcacctataccgcagtcattatggtggcggatttcttg
gaccctacgaaaaggaaccccccgccattgagatctcagaacggtcaagagcaatcacgg
aagtatccatcacttaggaagttttgcctgatgcagtcgaccgtagttgcgccattgctc
ctcttctgcacgcacgccatccgcatgcgagacactcgttgctgcagcataattctgcga
gtgttccgttccatcgtcccagacttcaccgtggctgagccactgtcgcccaagtcttta
ccccaagatggtgctgaggtggcaccgtccagcagggacccttacctcgatacctcgcca
gtatctgcggaagcagctactgccatcagggaatacatagcttcggacgtgctccgagct
tgcattacctccttccatgagccctactttgtagatctacaaaaagacttggcgtctctg
atcgctgccatagtggtttactatagccctgtcacgagcaccccgcgcgacatactcatg
tccctgcctaacatcaggcaagcagatcttgacagactcaatgactttgtggccaagcca
gcctcacacacgcggcaacagagagcacttgtgcttgacttgctcaaggacctcaaagga
gtcagtattgccgagatgggaaagctccccaagaacagcggcttcgggcgcagcaagagg
tcaaatcgtagcaagatggctcaggagttcatgacaccggccaacgagtcgagaacacgg
ggcggtggggttgctgatggggggcgtgccacaccagacgccttggagggggtggccggc
cttttcgagggctga
DBGET
integrated database retrieval system
