Colletotrichum lupini: CLUP02_06237
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Entry
CLUP02_06237 CDS
T08561
Name
(RefSeq) uncharacterized protein
KO
K18725
nucleoporin POM152
Organism
clup
Colletotrichum lupini
Pathway
clup03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLUP02_06237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_06237
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CLUP02_06237
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
zf-C4H2
Bact_surface_Ig-like
T4_Y13H
Motif
Other DBs
NCBI-GeneID:
73340247
NCBI-ProteinID:
XP_049142380
UniProt:
A0A9Q8WFC6
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All DBs
Position
3:join(4973810..4974256,4974309..4974457,4974515..4976592,4976642..4977750)
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AA seq
1260 aa
AA seq
DB search
MSATPRQRTGGFPQTPARRQDPDPNSSVSSQKSSHRTSSLPQAPESATRNGPATEPVIPL
TILDAPQQRFYAFAIYVGLLAWRFYDWIKLVEDNDTSAWLFLKWVFIDFGFLFGLPEMRI
PWLELSQPVVTAIFLIHAFFNFMLMFNIPLPLQPWLIGFLKVFYDRELAVSENTVKVSSI
LHNHSLIMGRQIINILPEGSAVLNFEQTPFCIGEGRETIRLPIQFNSTVPAEMELIRIDL
DTNLEETIKLSTREVRKIAKQIKDQTAESNPLAHSIEYPVKKTGVYRLGKVLDEYKLEVQ
RTTRDTYVVPCPKAGFRTPDKEDRCIRDLSNLLVDVTGTPPLKIVYSRTGKDNDRSFHFQ
SLQPEDYTSPLLGTPSSSLTQVGDEDISWVKPHTVAVRINETLDSPGQWQYAVDEVTDGF
GNVQKYAPSAEDAEVRPRPKHLARNFFVKERPRARLQDCDLRRPVKVAKGQKARLPVSFS
IAGKNPDTSHTLTWEFSPIDSLTNSGDHGDQVSLGSFTAANSHDKPYVSEPGLYTLKSVS
SGSCEGEVQEPSSCLLLNPLEPQLALRSEEIPDKCAGNSVGLRVDLDFIGTPPFVVRYDV
VDEQGKTRHERVEAKGLRQQVELRPTAAGHHKYIFKQIDDAIYKGQPLSPEMTLETDVKP
AASAHISHPTGLKSACLEQEVEVDILLLGDAPFTLEWELVHDGKRKSERVTDIEGSSYKI
KTKPLAKGGEYTLALNSVQDKSGCRTFLKDELKISVRRQRPRAAFGLLENKRITKVIEHA
DVKLPLRLQGEGPWTVSYRNVDGSDEIYEKTLRNGNDVLPVRSRGTYEIVNVKDNQCPGV
VDPQASKFEVDWYPRPEITVVPSDTITLDKGKYVKRDVCEGDIDAFEVNLKGSAPFHVDY
NIQHKPPQGYASTNKRDFDTSLNKASIPMDTSKSGEYTYQFSALADNLYNSEKNSRSLVI
DQRVNAKPSAAFVKPGQSFKYCKTEQDKEDTIPITLNGVAPFYIEIEIKHHSGTVPETYR
IPSIQGNTYGIHIPRQHLRLGIQHVRIREVRDARGCQKKYEIGAPSVQVHLHDAPAIYPL
ESRGDYCVGERIAYTLSGTPPFEIWYDFQGQQRKAKSSTTNFRRIAESPGEFTITSISDK
ASECRASVDITKTIHPLPAVKISRGRQTRVDIHEGNEVEILFEFWGTPPYEFTYTRSSNA
RKGQKSVVLETRHDVSYESSKIIRASQEGTYEVVAIKDKFCAFSTQQVADSGKEQKLLKY
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaacaccgagacagcggactggtggctttccacaaacaccagcccgacgacag
gatcccgacccgaactcctccgtttcctcccagaagagcagtcatcgcacatcttcgctt
cctcaagcccccgagagtgcgactcgaaatggccctgcgaccgagcccgtcattccttta
accatcctcgatgctccgcaacaacgcttctatgcctttgccatttacgtcgggctgctg
gcatggcgattctacgactggatcaagcttgtggaggataatgatacatcggcatggcta
tttctgaaatgggtctttatcgactttggctttctttttggcctcccggagatgaggata
ccatggctggagttgtcgcagcctgtagtcacggcaatcttcctcatccacgccttcttc
aacttcatgttgatgttcaacattccgctccccttgcaaccatggctcattggcttcctc
aaggtcttctacgaccgagagctggctgtttctgagaacactgtcaaggtttcaagcatt
ctgcataatcattccttgatcatgggcaggcagatcatcaacattttgccagaaggttct
gcggtactcaacttcgagcaaactccattctgcatcggcgaagggcgcgaaactattcga
ctacccatacagttcaactctacggtgcctgctgagatggagctcatccgcatcgacctt
gataccaatctggaagaaacgatcaagctgtccactagggaggttcgcaaaatcgcaaag
cagatcaaggaccaaacggcggaatcaaacccactggctcactcaatcgagtacccagtc
aagaagactggtgtgtaccgcctgggcaaggttctggatgaatacaagcttgaggtccaa
cgcacaacgagggacacctatgtagtgccgtgcccgaaggcaggtttccggacgcccgat
aaagaggaccggtgcatcagagacttgtccaacttgcttgttgacgtcaccggaacgccg
cccctgaaaattgtctacagtcggacaggaaaagacaacgatcgcagctttcatttccag
agcttgcagcctgaagattatacctcgcctttacttggtaccccatcttcttcattgact
caagttggtgatgaagacatctcctgggtcaagccccatacggtggccgtgcgcatcaac
gagacgctggatagcccagggcagtggcagtacgccgtggacgaggttacggatggcttc
ggcaacgttcagaagtacgctccgtctgccgaagatgcggaagtgcgtccccggcctaag
catctggcacgcaacttcttcgtcaaggagcggcccagagctcgcttgcaggattgtgac
ctacgcagaccggtcaaggttgccaagggccagaaggcaagacttccagtcagtttctcg
atagccgggaagaaccccgatacttcgcatacattgacttgggagttctcgcccatcgac
tctttgaccaacagcggagaccacggcgatcaggtttccttgggttcttttaccgcagcc
aactcccacgacaagccatatgtttcggagcctggtctctacacactcaaatctgtttct
agtggctcgtgcgaaggcgaagtgcaggagccgtcatcttgcctgttgctcaacccactc
gagccccagcttgctctccgttccgaagagatccccgacaaatgcgcaggtaactcagtg
ggactccgagttgacctggacttcatcggaacgccaccattcgtggttcgatacgacgtc
gttgacgagcagggcaagacccgacacgagcgggtggaagcaaagggtctcagacaacaa
gtcgaactgagacccactgcagctggtcatcacaagtacatcttcaagcagattgatgat
gctatctataagggtcagcctctcagccccgaaatgacgttggaaacggacgtgaagcca
gccgcctctgcacacatttcgcacccgaccggactcaagagcgcttgtctcgaacaggaa
gttgaagtcgacatcctccttctcggtgacgccccgtttacgctcgaatgggagctggtg
cacgatggaaaacgtaaatctgagcgtgtcaccgacatcgaggggtcatcgtacaagatt
aagaccaagcctcttgcgaagggcggagagtacacactcgctctcaacagcgtccaggat
aagtctggctgtcgcacgttcctgaaggatgagctcaagatctcggttaggcgccagcgg
ccccgcgcagcatttggcttgctcgagaacaagcgcatcaccaaggtcatcgaacatgcc
gatgtcaagctgcctttgcgacttcagggcgaaggaccttggactgtttcttaccgcaat
gttgatggaagtgatgagatctacgaaaagacgttgaggaacggcaacgatgtccttcct
gtcaggtcccgaggcacgtacgagatcgtcaacgtgaaagacaaccagtgtcctggtgtt
gtggaccctcaggcttccaagttcgaggtcgactggtaccctcgtccagagatcaccgtg
gtaccgtctgacacaatcacgttggataagggtaaatacgtcaaacgtgatgtttgtgag
ggggatatcgacgcttttgaggtcaacctgaagggctcggctccattccatgttgattac
aatattcagcacaaacctccccagggctatgcctcgaccaacaagagggatttcgacacg
tctctcaacaaagcgtccattcctatggatacctccaaatctggagagtacacgtaccag
ttctccgccctcgcagataatctctacaacagcgagaagaactctcggtcactcgtcatc
gaccaaagggtcaacgccaagccatctgctgccttcgtcaagcccggtcaatcgttcaag
tactgcaagaccgagcaagacaaggaagacaccattcctatcaccctgaacggtgtcgct
ccattctacattgagatcgaaatcaagcatcacagtggcaccgtccccgaaacatataga
attccttcgatccaaggtaacacgtacggcattcacattcccaggcagcatttacgtctt
ggaatccagcatgtccgcatccgcgaggttagagacgctcgcggatgccaaaagaagtac
gagatcggtgcgccatctgtgcaagttcatctccatgacgctcccgctatctaccctctg
gagagccgaggagactactgcgtcggtgaacgcattgcttatacgctttccggcacgcct
ccttttgagatttggtacgatttccagggccagcaacgcaaggctaagtctagcacaacc
aacttccgtcgtatcgccgagtcacctggcgaatttaccatcacctctatctctgataag
gcctcggagtgccgcgcctctgtcgacattaccaagactattcaccctctgcccgctgtc
aagatcagcaggggccgacagactcgggtggatatccatgaaggcaacgaagtggagatc
ctctttgagttctggggcactccgccgtacgaattcacatacactcgcagctccaatgcc
cgtaagggccagaagagcgtggtccttgagacacgccatgacgtctcttacgaaagcagc
aagatcattcgcgcgagccaagaaggtacatatgaggtggtcgcgatcaaggacaagttc
tgcgccttctctacccagcaggttgccgacagcggcaaagagcaaaagctgctcaaatat
tag
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