Colletotrichum lupini: CLUP02_06238
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Entry
CLUP02_06238 CDS
T08561
Name
(RefSeq) nrap protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
clup
Colletotrichum lupini
Pathway
clup03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CLUP02_06238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clup03009
]
CLUP02_06238
Ribosome biogenesis [BR:
clup03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CLUP02_06238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap_D3
Nrap
Nrap_D6
DUF7752
Motif
Other DBs
NCBI-GeneID:
73340248
NCBI-ProteinID:
XP_049142381
UniProt:
A0A9Q8WEG9
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All DBs
Position
3:complement(join(4978131..4981199,4981264..4981476))
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AA seq
1093 aa
AA seq
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MEQSAKRRKVSHKGDSKISANIATASPFVLQTDELLKEVKVDYAEALDGADALLHKIRNL
IQGIEPHGPIPIAEATRKFQKTNKIKIPYPDPKPADDAPYKLSYEKPAAYNVVGSYVSKT
MIQAQANKGVDMIVQMPASLFQEKDHQNMRYFYRRAYYIANIAAALRKELAGSADLEFEN
LNGNALLPVLSIRPSSTSESSESDESDEKAESGSSKSDFVIRIIPCAPEGVFPKKKLHPA
YNSNRNRQPENAKESTVSTPFYNSTIKAEDTFVTYLRVLTRAKADCAAFADACILGRIWL
QQRGLGSSLAKGGFGHFEWAIMMALLLQTGGRNGQPALSSALSSTELFKATVQFLASTEF
AKKPFVFGTYKLGADLIRENGPVMFDPEREVNILYKMSPWSASLLHFHASTTMEVLNDTL
ANQFEPTFITKADLPLHLFDSIFEIQNVDSNSKSTNPDRRGAVWDLSFKAYTVLKKALKE
RSQLIHFASQDPAPWSITSTRPTNLSNIQVGVIFDPANMGRLMEYGPSAELEKEAAKFRK
FWGDKAELRRFQDGSILECVQWTRQTSAEICEEIVRYVLQRHVSLGAGDLRFHDADIPPS
LDISPFDRESFEAARKAFSTLEQDIRGLEEMPLSVRQIAPVVPELRSASVTPPFALSQKS
GPPPMDVNLYFEASSKWPENLVAIQESKIEFLLDIDRRLRAAHDNISTSLGRDNAARDID
NLAYLDIIYPNGAAFRLRIYAELEEALLDRQARNKTLDPQSRVQAEEALFNLNWRHKHLP
LHTQTITTYCTRFTTLSNTIRLVKHWFNVHKLASHISEELIELLVLHVFLNPNPWKVPSS
TMSGFLRTILFLSRWDWRDEALVVDSSDDMTADDRAVAQHHLEAWRARDPTMSHAVLFVA
TPHDHLGLAYTRQGPSKLLATRMTRLAKASSKKIKEQGIALDVAELFQPSLADYDVLLHL
STSGLKRVARDAASEAGTRTSLFKNLDERTGKIPLPLARHPATVLLTELETAYEDTLVFF
HGASGDAVIGAIWQPKLRSRQKFRVGLPYNFHRVKGDSDDDEEGDVVEVNKPAVLLEIAR
IGGDLIKKIELIE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaacagagcgccaagcgacgtaaggtttcccacaagggcgactccaagatctctgcc
aacatcgcgacggcgagtccattcgtcctacagacggacgaactgttgaaggaggtcaag
gttgactacgccgaggctctcgatggcgctgacgccctgttgcataagatcagaaacctg
atccaaggaattgagcctcatggtcctattcctatcgccgaagccacgcgcaagttccag
aagacgaataagatcaagattccctatccggacccgaaacccgccgacgatgcgccgtac
aagctgtcatacgaaaagcccgccgcttacaatgtcgtgggcagctacgtctcgaagacg
atgatccaggcccaggccaacaagggtgtggacatgattgtgcagatgccggcttcgcta
ttccaagaaaaggatcaccagaacatgcgctacttctaccgcagagcctactatattgcg
aatattgcagccgccttgcgcaaggagttggcaggatcggccgacctggagttcgagaat
ctcaatggcaacgcccttctgcccgtcctctccatcagaccctcttcaacatccgaatcg
tcagaaagcgacgagagcgacgagaaggccgaatcggggtcttcaaagtcggatttcgtc
attcggatcattccttgcgcgccggaaggtgtcttccccaagaagaagttgcaccccgcg
tacaacagcaaccgaaataggcagccggagaacgccaaggagtcgactgtgtctacgccc
ttctacaactcgaccattaaggctgaagacacatttgtcacgtatctgcgggtcctcact
agagccaaggcggattgcgccgccttcgcagacgcttgcatactcggaagaatctggctc
caacaacgaggtttgggcagttcgctggccaagggtggattcggtcactttgaatgggca
atcatgatggcgttgctgctgcagaccggtggacggaacggccagccggcgctttcttcg
gctctgagcagcactgagctattcaaggccacggtccagttccttgcgtctaccgagttt
gctaagaagccctttgtctttggcacatacaagctgggcgctgacctcattcgagagaac
ggccccgtcatgttcgatcccgaacgtgaagtcaacattttatacaagatgagcccctgg
tcagcgagccttctccacttccacgccagcaccaccatggaagtactcaacgacactctg
gcaaaccagttcgagccgaccttcatcaccaaagccgacttgccgctacacctattcgat
agcattttcgagatccaaaacgtggacagcaactcaaaaagcacaaaccccgatcgacga
ggtgccgtctgggatctaagcttcaaggcttacaccgttctgaagaaggcgttgaaggaa
aggtcacagctgattcatttcgcgagtcaagacccagcaccgtggtcaatcaccagcacc
cggcccacgaacctgtccaacatccaggttggcgtcatcttcgaccctgccaacatggga
cgcttgatggagtatggtccttcggccgagctcgagaaggaggcggcaaagttccgcaag
ttctggggtgacaaggccgagctccgtcgcttccaggacggcagcatcctcgagtgcgtg
cagtggacgcggcagacgtctgcagaaatctgcgaagagatcgtccggtacgtcctccag
cgccacgtgagccttggtgctggcgatttgcgcttccacgatgccgatatccccccttcc
ctggacatctcgccctttgacagggaatccttcgaggcagcgagaaaggccttcagcacg
ctcgagcaggacatccgcggcctggaggagatgccgctctcggtcaggcaaatcgccccc
gttgtccccgaactgcgatccgcgtcggtcacgccgccctttgcgctctctcagaaatcc
ggccctccgcccatggacgtaaacctctactttgaggcatccagcaagtggccggagaac
cttgtcgcgatccaggagtccaaaattgagttcctgctcgacattgaccgtcggttacgc
gctgcccacgacaacatctcaacgagcctcggtcgcgacaacgcagcacgggatatcgac
aaccttgcctacctggacatcatctaccccaacggcgccgctttccgactgcgcatctac
gcagagctcgaggaggccctcctagaccgccaagccaggaacaagacgctggacccccag
agcagagtccaggccgaagaggccctcttcaacctcaactggcgccacaagcacctgccc
ctccacacgcagacaatcacaacctactgcacccgcttcaccaccctctccaacacgatc
cgcctcgtcaagcactggttcaacgtgcacaagctcgcgagccacatctcggaagagctc
atcgagctcctcgtcctccacgtcttcctcaacccgaacccctggaaggtcccctccagc
acaatgtccggcttcctccgcaccatcctcttcctctcccgctgggactggcgcgacgag
gccctcgtcgtcgactcctccgacgacatgaccgccgacgaccgcgccgtcgcccagcac
cacctcgaggcctggcgcgcccgcgacccgacaatgtcccacgcagtcctcttcgtcgcc
accccgcacgaccacctaggcctggcctacacccgccaggggccctccaagctcctcgca
acacgcatgacccgcctcgcgaaagcctccagcaaaaagatcaaggagcaaggcatcgcg
ctcgacgtcgccgagctcttccagccgtccctggcagactacgacgtcctcctccacctc
tccacctcgggcctgaaacgcgtcgcccgcgacgccgcctccgaggcgggcacccgcacc
tccctcttcaagaacctcgacgagcgcacggggaaaatcccgctgccgctcgcgcgacac
ccggcgacggtcctgctgacggagctcgagacggcgtacgaggacaccctcgtcttcttc
cacggcgcgtccggcgacgccgtcatcggcgccatctggcagcccaagctgcgcagtcgg
caaaagttccgtgtcggtctgccctacaacttccaccgggtcaagggcgacagcgacgac
gacgaggagggcgatgtggtcgaggtgaacaaaccggctgtgctgctggagattgctagg
atcggtggtgacttgatcaagaagattgagctcattgaatag
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